RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZFXP17010 805 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 MPSTP25325 297 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 MAP4P27816 1152 aaKnown RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 UBE2IP63279 158 aaKnown RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 SLC10A2Q12908 348 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 ZBTB17Q13105 803 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 NFATC2Q13469 925 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 MAP7Q14244 749 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 PDK1Q15118 436 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 SLC9A4Q6AI14 798 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 CCDC137Q6PK04 289 aaKnown RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 PLXDC1Q8IUK5 500 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 PLD5Q8N7P1 536 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 JPH3Q8WXH2 748 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 NCSTNQ92542 709 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 TRIB3Q96RU7 358 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 SPATA16Q9BXB7 569 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 FRMD8P1Q9BZ68 369 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 OSBPL8Q9BZF1 889 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 MAGEE1Q9HCI5 957 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 CPNE7Q9UBL6 633 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 PRKAB1Q9Y478 270 aa13.38□□□□□ -0.27
SMAD3-214ENST00000560402 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 PCYT1BQ9Y5K3 369 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-214ENST00000560402 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TOX3O15405 576 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TTI1O43156 1089 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 SUV39H1O43463 412 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 SNX2O60749 519 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 SLC25A14O95258 325 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-214ENST00000560402 PTPN7P35236 360 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-214ENST00000560402 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
SMAD3-214ENST00000560402 CYP4F2P78329 520 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 MC1RQ01726 317 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 GALNT3Q14435 633 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 CLCA4Q14CN2 919 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 PPP1R7Q15435 360 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 SNAP47Q5SQN1 464 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 ALS2CLQ60I27 953 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 CPNE8Q86YQ8 564 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 CNTD1Q8N815 330 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 BBOF1Q8ND07 529 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 RAPGEF5Q92565 580 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 GLYATL1Q969I3 302 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 IMP4Q96G21 291 aaKnown RBP13.37□□□□□ -0.27
SMAD3-214ENST00000560402 OLFM3Q96PB7 478 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TIMM29Q9BSF4 260 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 SPRY4Q9C004 299 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TSPYL1Q9H0U9 437 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 SLC25A51Q9H1U9 297 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 GPN2Q9H9Y4 310 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TRIM39Q9HCM9 518 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 POT1Q9NUX5 634 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 ATXN10Q9UBB4 475 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 NFU1Q9UMS0 254 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 EFR3BQ9Y2G0 817 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 HEY1Q9Y5J3 304 aa13.37□□□□□ -0.27
SMAD3-214ENST00000560402 TRBV23OR9-2A0A075B6M9 112 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 CHUKO15111 745 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 KMOO15229 486 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 VEGFDO43915 354 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 C9P02748 559 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 ZNF8P17098 575 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-214ENST00000560402 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-214ENST00000560402 MAPK9P45984 424 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 CCR10P46092 362 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 POLE2P56282 527 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 CDK18Q07002 472 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 AP1B1Q10567 949 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 KCNAB2Q13303 367 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 INSCQ1MX18 579 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 CRTC2Q53ET0 693 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-214ENST00000560402 CYB5D1Q6P9G0 228 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 LRRTM4Q86VH4 590 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 TRIM48Q8IWZ4 208 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 RBM12BQ8IXT5 1001 aaKnown RBP13.36□□□□□ -0.27
SMAD3-214ENST00000560402 MREGQ8N565 214 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 ESX1Q8N693 406 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 PRELID2Q8N945 189 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 SLCO2A1Q92959 643 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 TADA1Q96BN2 335 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 PLEKHG4BQ96PX9 1271 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 VPS35Q96QK1 796 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 MAK16Q9BXY0 300 aaKnown RBP13.36□□□□□ -0.27
SMAD3-214ENST00000560402 GPR63Q9BZJ6 419 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 OR2AG1Q9H205 316 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 OSGEPL1Q9H4B0 414 aa13.36□□□□□ -0.27
SMAD3-214ENST00000560402 SIDT1Q9NXL6 827 aaKnown RBP13.36□□□□□ -0.27
SMAD3-214ENST00000560402 A8MU76 341 aa13.35□□□□□ -0.27
SMAD3-214ENST00000560402 POLR1CO15160 346 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-214ENST00000560402 STK17BO94768 372 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms