RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MCOLN2Q8IZK6 566 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 RUBCNLQ9H714 662 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 KCND1Q9NSA2 647 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 PKD2L2Q9NZM6 624 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 TRIM10Q9UDY6 481 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 WDR37Q9Y2I8 494 aa12.53□□□□□ -0.4
RABGGTA-213ENST00000560127 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.4
RABGGTA-213ENST00000560127 SYCE3A1L190 88 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 RGSL1A5PLK6 1076 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 TLCD2A6NGC4 264 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 E2F3O00716 465 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 KMOO15229 486 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 PRPSAP2O60256 369 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 SLC25A14O95258 325 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ATP1A3P13637 1013 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 FECHP22830 423 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ARL4DP49703 201 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 MYL5Q02045 173 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 DSC2Q02487 901 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ITKQ08881 620 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 IQCB1Q15051 598 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 TMCO3Q6UWJ1 677 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 Q6ZS92 163 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 LRRTM4Q86VH4 590 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 KCNMB4Q86W47 210 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 LPCAT1Q8NF37 534 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 GPR150Q8NGU9 434 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 EID2BQ96D98 161 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 LURAP1Q96LR2 239 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 AGPAT1Q99943 283 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 TRIM7Q9C029 511 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 POLR1EQ9GZS1 481 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ZBTB20Q9HC78 741 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 LATS2Q9NRM7 1088 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 AGPAT4Q9NRZ5 378 aa12.52□□□□□ -0.41
RABGGTA-213ENST00000560127 ACANP16112 2415 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 H3BRJ5 948 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 MTX2O75431 263 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 IDSP22304 550 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 ABRQ12979 859 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 MYBPC3Q14896 1274 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 QPCTQ16769 361 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 ANKRD20A8PQ5CZ79 823 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF569Q5MCW4 686 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 HGSNATQ68CP4 663 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 ACAD10Q6JQN1 1059 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 C11orf96Q7Z7L8 435 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 TTC30BQ8N4P2 665 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 OR8K5Q8NH50 307 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 CPT1BQ92523 772 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 CD180Q99467 661 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 BPIFA3Q9BQP9 254 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 PCDH9Q9HC56 1237 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 TAS2R14Q9NYV8 317 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 ITGB1BP2Q9UKP3 347 aa12.51□□□□□ -0.41
RABGGTA-213ENST00000560127 UBA6A0AVT1 1052 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 TMEM191CA6NGB0 347 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 RNF8O76064 485 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 LCA5LO95447 670 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 ZBTB11O95625 1053 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 ALPPP05187 535 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 IL1R2P27930 398 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 OTX2P32243 289 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 RPL26P61254 145 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 NIPAL4Q0D2K0 466 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 NCF4Q15080 339 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 SYCP1Q15431 976 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 KHDC1Q4VXA5 237 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 PLEKHA7Q6IQ23 1121 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 SPOCD1Q6ZMY3 1216 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 GDF7Q7Z4P5 450 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 MRGPREQ86SM8 312 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 RAB43Q86YS6 212 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 GALNT16Q8N428 558 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 ZADH2Q8N4Q0 377 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 GPR26Q8NDV2 337 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 ARRDC2Q8TBH0 407 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 GLYATL1Q969I3 302 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 CLIP3Q96DZ5 547 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 PPM1MQ96MI6 270 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms