RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PLCL2Q9UPR0 1127 aa4.47□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLEKHA6Q9Y2H5 1048 aa4.47□□□□□ -1.69
HMGB3P26-201ENST00000560051 KIF24Q5T7B8 1368 aa4.47□□□□□ -1.69
HMGB3P26-201ENST00000560051 PARD3Q8TEW0 1356 aa4.47□□□□□ -1.69
HMGB3P26-201ENST00000560051 PLB1Q6P1J6 1458 aa4.47□□□□□ -1.69
HMGB3P26-201ENST00000560051 KIAA1107Q9UPP5 1409 aa4.46□□□□□ -1.69
HMGB3P26-201ENST00000560051 MTUS2Q5JR59 1369 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 LOC100509620A0A075B734 347 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PVALEFA0A1B0GWK0 134 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 FUOMA2VDF0 154 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 URADA6NGE7 173 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 LIPT2A6NK58 231 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SAC3D1A6NKF1 404 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 TRPC5OSA6NMA1 111 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PDZK1P1A8MUH7 402 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 BECN2A8MW95 431 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 LGALS8O00214 317 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NR5A2O00482 541 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SYN3O14994 580 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 MATN3O15232 486 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 INSIG1O15503 277 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 TGFB1I1O43294 461 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ASNA1O43681 348 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 B4GALT2O60909 372 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 VPS4BO75351 444 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SCGB2A1O75556 95 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ACTL6BO94805 426 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PIGNO95427 931 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 VNN2O95498 520 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NDST3O95803 873 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 DHFRP00374 187 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SERPINA5P05154 406 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ABHD2P08910 425 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 LINGO3P0C6S8 592 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 MCF2P10911 925 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLC2A3P11169 496 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 CHRNB1P11230 501 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ITGA4P13612 1032 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ITGAXP20702 1163 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 POU1F1P28069 291 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 EPHA8P29322 1005 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SHMT1P34896 483 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NUDT1P36639 197 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SREBF1P36956 1147 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 CCR10P46092 362 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 CDK9P50750 372 aaKnown RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 UBE2HP62256 183 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 OCA2Q04671 838 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PLP2Q04941 152 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 OLIG2Q13516 323 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 IL10RAQ13651 578 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SF3B4Q15427 424 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 GPR162Q16538 588 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 UGT8Q16880 541 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZXDCQ2QGD7 858 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLC36A3Q495N2 470 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SPATS1Q496A3 300 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 XKR4Q5GH76 650 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 C3orf38Q5JPI3 329 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PAGE2BQ5JRK9 111 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PDZK1Q5T2W1 519 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 HES5Q5TA89 166 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NKAIN2Q5VXU1 208 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 MBNL2Q5VZF2 373 aaKnown RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 RRAGBQ5VZM2 374 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZDHHC20Q5W0Z9 365 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 BTBD8Q5XKL5 378 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 E4F1Q66K89 784 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 KCTD11Q693B1 232 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 FSTL4Q6MZW2 842 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ESRP1Q6NXG1 681 aaKnown RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ZNF530Q6P9A1 599 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NCEH1Q6PIU2 408 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 RSPO2Q6UXX9 243 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 RTL4Q6ZR62 310 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 USP37Q86T82 979 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SLC13A5Q86YT5 568 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 CCDC60Q8IWA6 550 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 KLHL7Q8IXQ5 586 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 PPIL6Q8IXY8 311 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 GALNT4Q8N4A0 578 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ASCC1Q8N9N2 400 aaKnown RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 GLIS1Q8NBF1 620 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 UXS1Q8NBZ7 420 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 DAGLBQ8NCG7 672 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 RNF169Q8NCN4 708 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 OR6B3Q8NGW1 331 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 SCAMP5Q8TAC9 235 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 FEZF2Q8TBJ5 459 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 ST7LQ8TDW4 575 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 NRG4Q8WWG1 115 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 KAT5Q92993 513 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 TMEM143Q96AN5 459 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 DACT3Q96B18 629 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 RGMAQ96B86 450 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 HAVCR1Q96D42 359 aa4.46□□□□□ -1.7
HMGB3P26-201ENST00000560051 TESK2Q96S53 571 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms