RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 BEND7Q8N7W2 519 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 EEF1AKMT1Q8WVE0 214 aa12□□□□□ -0.49
HERC1-205ENST00000559886 BIRC7Q96CA5 298 aa12□□□□□ -0.49
HERC1-205ENST00000559886 PDLIM5Q96HC4 596 aaKnown RBP12□□□□□ -0.49
HERC1-205ENST00000559886 ZNF514Q96K75 400 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 APOOQ9BUR5 198 aa12□□□□□ -0.49
HERC1-205ENST00000559886 FAM126AQ9BYI3 521 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 EBF2Q9HAK2 575 aa12□□□□□ -0.49
HERC1-205ENST00000559886 TMEM98Q9Y2Y6 226 aa12□□□□□ -0.49
HERC1-205ENST00000559886 KPNA5O15131 536 aa12□□□□□ -0.49
HERC1-205ENST00000559886 APOA4P06727 396 aa12□□□□□ -0.49
HERC1-205ENST00000559886 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 ZNF8P17098 575 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 HOXA6P31267 233 aa12□□□□□ -0.49
HERC1-205ENST00000559886 NUDT1P36639 197 aa12□□□□□ -0.49
HERC1-205ENST00000559886 GLRBP48167 497 aa12□□□□□ -0.49
HERC1-205ENST00000559886 SERPINB4P48594 390 aa12□□□□□ -0.49
HERC1-205ENST00000559886 GTF2H3Q13889 308 aa12□□□□□ -0.49
HERC1-205ENST00000559886 LRRC8EQ6NSJ5 796 aa12□□□□□ -0.49
HERC1-205ENST00000559886 KLC3Q6P597 504 aa12□□□□□ -0.49
HERC1-205ENST00000559886 ISCA2Q86U28 154 aa12□□□□□ -0.49
HERC1-205ENST00000559886 MYOCQ99972 504 aa12□□□□□ -0.49
HERC1-205ENST00000559886 PAIP2Q9BPZ3 127 aaKnown RBP12□□□□□ -0.49
HERC1-205ENST00000559886 CAPS2Q9BXY5 557 aa12□□□□□ -0.49
HERC1-205ENST00000559886 UNKQ9C0B0 810 aaKnown RBP12□□□□□ -0.49
HERC1-205ENST00000559886 PCED1AQ9H1Q7 454 aa12□□□□□ -0.49
HERC1-205ENST00000559886 GPR34Q9UPC5 381 aa12□□□□□ -0.49
HERC1-205ENST00000559886 DMTF1Q9Y222 760 aa12□□□□□ -0.49
HERC1-205ENST00000559886 POM121BA6NF01 834 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TMEM221A6NGB7 291 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TARM1B6A8C7 271 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 GPR89AB7ZAQ6 455 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 M0R296 226 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 FPGTO14772 594 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 CHUKO15111 745 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 AXIN1O15169 862 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 FSBPO95073 299 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 GPR89BP0CG08 455 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 DGKAP23743 735 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 AKT2P31751 481 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 ATP6V0D1P61421 351 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 IRX4P78413 519 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 IL9RQ01113 521 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 GBX1Q14549 363 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TTLL9Q3SXZ7 439 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TECRLQ5HYJ1 363 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TTC19Q6DKK2 380 aaPredicted RBP11.99□□□□□ -0.49
HERC1-205ENST00000559886 ZNF547Q8IVP9 402 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 ABCA7Q8IZY2 2146 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TMEM145Q8NBT3 493 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 DYDC1Q8WWB3 177 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 FOXJ1Q92949 421 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 LINGO1Q96FE5 620 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 BMFQ96LC9 184 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 LINC00615Q96LM1 132 aaPredicted RBP11.99□□□□□ -0.49
HERC1-205ENST00000559886 MRPL57Q9BQC6 102 aaKnown RBP11.99□□□□□ -0.49
HERC1-205ENST00000559886 CCM2Q9BSQ5 444 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 MRPL46Q9H2W6 279 aaKnown RBP11.99□□□□□ -0.49
HERC1-205ENST00000559886 SPATA6Q9NWH7 488 aaPredicted RBP11.99□□□□□ -0.49
HERC1-205ENST00000559886 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.99□□□□□ -0.49
HERC1-205ENST00000559886 HS3ST3A1Q9Y663 406 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 A6NNZ2 444 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 ZBTB14O43829 449 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 NUAK1O60285 661 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 RBP1P09455 135 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 SBK3P0C264 359 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 CBSLP0DN79 551 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TFEBP19484 476 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 CBSP35520 551 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 RGS4P49798 205 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 CLDN2P57739 230 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TUBB8Q3ZCM7 444 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 ACSBG2Q5FVE4 666 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 DOK6Q6PKX4 331 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 NAPRTQ6XQN6 538 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 TRAPPC5Q8IUR0 188 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 CCDC63Q8NA47 563 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 CKAP2Q8WWK9 683 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 PTERQ96BW5 349 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 SCYL1Q96KG9 808 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 XPR1Q9UBH6 696 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 A0A0C4DFX4 3053 aa11.99□□□□□ -0.49
HERC1-205ENST00000559886 ZDBF2Q9HCK1 2354 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 PRAMEF26H0Y7S4 382 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 TK2O00142 265 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 EIF3FO00303 357 aaPredicted RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 CACNB4O00305 520 aaPredicted RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 BIRC5O15392 142 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 NDUFS2O75306 463 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 GSTM1P09488 218 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 PFN3P60673 137 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CBX1P83916 185 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 GSTM4Q03013 218 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 ZNF658BQ4V348 819 aaPredicted RBP11.98□□□□□ -0.49
HERC1-205ENST00000559886 GCNT7Q6ZNI0 430 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 TAX1BP1Q86VP1 789 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 CADM4Q8NFZ8 388 aa11.98□□□□□ -0.49
HERC1-205ENST00000559886 RHEBL1Q8TAI7 183 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms