RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PADI1Q9ULC6 663 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 MAN2B2Q9Y2E5 1009 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 WDR37Q9Y2I8 494 aa12.84□□□□□ -0.35
TPM1-220ENST00000559556 IGHV5-51A0A0C4DH38 117 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 MTSS1O43312 755 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 PMPCBO75439 489 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 KATNA1O75449 491 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 ARHGAP25P42331 645 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 HALP42357 657 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 TUBB3Q13509 450 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 GTF2H3Q13889 308 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
TPM1-220ENST00000559556 LRRC38Q5VT99 294 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 CCDC70Q6NSX1 233 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 TMEM135Q86UB9 458 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 TTC30BQ8N4P2 665 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 TEX19Q8NA77 164 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 SIDT2Q8NBJ9 832 aaKnown RBP12.83□□□□□ -0.36
TPM1-220ENST00000559556 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 BRSK1Q8TDC3 778 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 CT55Q8WUE5 264 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 ELMO2Q96JJ3 720 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 TEKT5Q96M29 485 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 ZCCHC2Q9C0B9 1178 aaKnown RBP12.83□□□□□ -0.36
TPM1-220ENST00000559556 TWSG1Q9GZX9 223 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 TRABDQ9H4I3 376 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 ACTL8Q9H568 366 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 BPIFA1Q9NP55 256 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 PDE7BQ9NP56 450 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 IFNKQ9P0W0 207 aa12.83□□□□□ -0.36
TPM1-220ENST00000559556 LOC285095A0A1B0GVY8 99 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 SSU72P8A0A1W2PR75 194 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 CDC14CA4D256 554 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 TLCD2A6NGC4 264 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 KRT1P04264 644 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 PTPN3P26045 913 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 ZDHHC20Q5W0Z9 365 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 KLHL35Q6PF15 583 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 KDELC1Q6UW63 502 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 ASB18Q6ZVZ8 466 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 AMZ2Q86W34 360 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 BPHLQ86WA6 291 aaPredicted RBP12.82□□□□□ -0.36
TPM1-220ENST00000559556 KMT5CQ86Y97 462 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 DDHD1Q8NEL9 900 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 GDAP1Q8TB36 358 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 SEC14L1Q92503 715 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 PSMG3-AS1Q96PY0 264 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 CD180Q99467 661 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 DNAJC7Q99615 494 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 MAK16Q9BXY0 300 aaKnown RBP12.82□□□□□ -0.36
TPM1-220ENST00000559556 IL26Q9NPH9 171 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 UBP1Q9NZI7 540 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
TPM1-220ENST00000559556 IL17CQ9P0M4 197 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 TRIM10Q9UDY6 481 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 TLK1Q9UKI8 766 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■■□□ 19.1
TPM1-220ENST00000559556 PCNX1Q96RV3 2341 aa12.82□□□□□ -0.36
TPM1-220ENST00000559556 SYCE3A1L190 88 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 PIPSLA2A3N6 862 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 GAPDHSO14556 408 aaPredicted RBP12.81□□□□□ -0.36
TPM1-220ENST00000559556 GPR39O43194 453 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 EPOP01588 193 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 FOLR1P15328 257 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 CD68P34810 354 aaPredicted RBP12.81□□□□□ -0.36
TPM1-220ENST00000559556 SPAM1P38567 509 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 NR2C2P49116 596 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 CTSCP53634 463 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 MLLT10P55197 1068 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 DYNLT1P63172 113 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 SEMA5AQ13591 1074 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 KCNAB1Q14722 419 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 NOMO1Q15155 1222 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 RPE65Q16518 533 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 TAZQ16635 292 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 UGT8Q16880 541 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 SIRPB2Q5JXA9 342 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 LDLRAP1Q5SW96 308 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 FAM83HQ6ZRV2 1179 aaPredicted RBP12.81□□□□□ -0.36
TPM1-220ENST00000559556 B4GALNT4Q76KP1 1039 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 ATCAYQ86WG3 371 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 RHOT2Q8IXI1 618 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 RASGEF1AQ8N9B8 481 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 ZNF514Q96K75 400 aaPredicted RBP12.81□□□□□ -0.36
TPM1-220ENST00000559556 TTC25Q96NG3 672 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 GPR87Q9BY21 358 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 FGF21Q9NSA1 209 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 SMOXQ9NWM0 555 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 DDX56Q9NY93 547 aaKnown RBP12.81□□□□□ -0.36
TPM1-220ENST00000559556 HACD3Q9P035 362 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 FAM153AQ9UHL3 310 aa12.81□□□□□ -0.36
TPM1-220ENST00000559556 DNMT3AQ9Y6K1 912 aaPredicted RBP12.81□□□□□ -0.36
TPM1-220ENST00000559556 TEP1Q99973 2627 aaKnown RBP12.8□□□□□ -0.36
TPM1-220ENST00000559556 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
TPM1-220ENST00000559556 DNAJB5O75953 348 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms