RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 CACHD1Q5VU97 1274 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 C6orf15Q6UXA7 325 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-213ENST00000559399 FAM92BQ6ZTR7 304 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 GBA3Q9H227 469 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 UGT1A7Q9HAW7 530 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 UGT1A10Q9HAW8 530 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 UGT1A8Q9HAW9 530 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 EPHA6Q9UF33 1036 aa14.65□□□□□ -0.06
LRRC28-213ENST00000559399 BUD23O43709 281 aaKnown RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 NDUFA10O95299 355 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 LCA5LO95447 670 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 ZNF28P17035 718 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 TCN2P20062 427 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 FECHP22830 423 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 OAS2P29728 719 aaKnown RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 XRCC4Q13426 336 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 SPA17Q15506 151 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 LONRF2Q1L5Z9 754 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 CCDC181Q5TID7 509 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 CYB5D1Q6P9G0 228 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 KLHL35Q6PF15 583 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 BBS12Q6ZW61 710 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 PTRH1Q86Y79 214 aaKnown RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 RASGRP3Q8IV61 690 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 TC2NQ8N9U0 490 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 GPR150Q8NGU9 434 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 C9orf43Q8TAL5 461 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 APOBEC4Q8WW27 367 aaKnown RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 KLHL6Q8WZ60 621 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 KRT35Q92764 455 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 STAMBPL1Q96FJ0 436 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 ELMO2Q96JJ3 720 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 ZNF514Q96K75 400 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 FERMT1Q9BQL6 677 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 HEMGNQ9BXL5 484 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 RAB33BQ9H082 229 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 LUC7LQ9NQ29 371 aaKnown RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 CROTQ9UKG9 612 aa14.64□□□□□ -0.07
LRRC28-213ENST00000559399 DNMT3AQ9Y6K1 912 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-213ENST00000559399 SETXQ7Z333 2677 aaKnown RBP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 SDK2Q58EX2 2172 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 OR2AG2A6NM03 316 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 H7C0C1 242 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 APOC4-APOC2K7ER74 178 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 GAPDHSO14556 408 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 STX7O15400 261 aaKnown RBP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 ANXA9O76027 345 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 KIAA0754O94854 1291 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 PRAMEF1O95521 474 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 APOC2P02655 101 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 FGF5P12034 268 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 NELFEP18615 380 aaKnown RBP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 MSH3P20585 1137 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 AKT1P31749 480 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 DLSTP36957 453 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 ATP5OP48047 213 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 TLE1Q04724 770 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 NFE2L1Q14494 772 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 PLCL1Q15111 1095 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 RPE65Q16518 533 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 DEFB109BQ30KR1 87 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 FNBP1LQ5T0N5 605 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 ITPRIPL1Q6GPH6 555 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 C16orf46Q6P387 395 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 TMEM220Q6QAJ8 160 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 SARM1Q6SZW1 724 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 FAM83HQ6ZRV2 1179 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 DAAM2Q86T65 1068 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 PPP1R3BQ86XI6 285 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 CCDC170Q8IYT3 715 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 GALNT6Q8NCL4 622 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 UBXN4Q92575 508 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 RNF31Q96EP0 1072 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 FICDQ9BVA6 458 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 IMP3Q9NV31 184 aaKnown RBP14.63□□□□□ -0.07
LRRC28-213ENST00000559399 LNPEPQ9UIQ6 1025 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 PSMD13Q9UNM6 376 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 TFR2Q9UP52 801 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 PCDHA13Q9Y5I0 950 aa14.63□□□□□ -0.07
LRRC28-213ENST00000559399 MACROD2A1Z1Q3 448 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 GOLGA6L3A6NEY3 463 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 C2orf81A6NN90 581 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 AGTP01019 485 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 MTHFD1P11586 935 aaKnown RBP14.62□□□□□ -0.07
LRRC28-213ENST00000559399 F8A1P23610 371 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 RBL1P28749 1068 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 PBLDP30039 288 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-213ENST00000559399 CA5AP35218 305 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 GEMP55040 296 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 COPS2P61201 443 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 PPP1CAP62136 330 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 SEPT6Q14141 434 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 ATP1A1-AS1Q5TC04 95 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 CDKL3Q8IVW4 592 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-213ENST00000559399 ZNF398Q8TD17 642 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 TRIM5Q9C035 493 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 PDE7BQ9NP56 450 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 KCTD3Q9Y597 815 aa14.62□□□□□ -0.07
LRRC28-213ENST00000559399 PCDHB3Q9Y5E6 796 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms