RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SLC25A51Q9H1U9 297 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 MMADHCQ9H3L0 296 aaPredicted RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 CCDC86Q9H6F5 360 aaKnown RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 ZC3H7BQ9UGR2 993 aaKnown RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 PCDHGC4Q9Y5F7 938 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 GOLGA4Q13439 2230 aaKnown RBP10.21□□□□□ -0.77
TPM1-212ENST00000558347 ANKRD11Q6UB99 2663 aaPredicted RBP10.21□□□□□ -0.77
TPM1-212ENST00000558347 TRABD2BA6NFA1 517 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 FAM159BA6NKW6 160 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 A8MUI8 341 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 TRIM49D1C9J1S8 452 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 H3BM21 787 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 BIRC5O15392 142 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 AQP9O43315 295 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 HTRA2O43464 458 aaPredicted RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 LZTS3O60299 673 aaPredicted RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 PEX11AO75192 247 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 ALPPL2P10696 532 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 PYGBP11216 843 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 CDK4P11802 303 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 CKMT1AP12532 417 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 GNAZP19086 355 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 CES1P23141 567 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 SERPINB4P48594 390 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 THOP1P52888 689 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 DAB2P98082 770 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 ILKQ13418 452 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 PTK2BQ14289 1009 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 AGERQ15109 404 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 LRRC8BQ6P9F7 803 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 LIPIQ6XZB0 460 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 MACC1Q6ZN28 852 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 ZNF534Q76KX8 674 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 MTDHQ86UE4 582 aaKnown RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 CAND1Q86VP6 1230 aaKnown RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 PHACTR4Q8IZ21 702 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 PDCD7Q8N8D1 485 aaKnown RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 PLA2G15Q8NCC3 412 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 FAM13CQ8NE31 585 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 RFWD2Q8NHY2 731 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 GSDMBQ8TAX9 411 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 ARRDC2Q8TBH0 407 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 LMX1AQ8TE12 382 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 PTCD3Q96EY7 689 aaKnown RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 CFAP36Q96G28 342 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 NUDCD1Q96RS6 583 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 EBNA1BP2Q99848 306 aaKnown RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 MGME1Q9BQP7 344 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 SIKE1Q9BRV8 207 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 LRRC40Q9H9A6 602 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 NT5MQ9NPB1 228 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 KCNK4Q9NYG8 393 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 APOBEC3BQ9UH17 382 aaKnown RBP10.21□□□□□ -0.78
TPM1-212ENST00000558347 PLLPQ9Y342 182 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 L3MBTL1Q9Y468 752 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 PKD1L2Q7Z442 2459 aa10.21□□□□□ -0.78
TPM1-212ENST00000558347 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 NEMP2A6NFY4 417 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 A8MX80 341 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 GOLGA8RI6L899 631 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 AP3B1O00203 1094 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 TOR1BO14657 336 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 RECQL5O94762 991 aaPredicted RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 PCCBP05166 539 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 CELA2BP08218 269 aaPredicted RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 ELFN1P0C7U0 828 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 NEFHP12036 1026 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 JUPP14923 745 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 GCKP35557 465 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 HNF1BP35680 557 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 CLNS1AP54105 237 aaKnown RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 CYP4F3Q08477 520 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 TRAF2Q12933 501 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 TARDBPQ13148 414 aaKnown RBP eCLIP10.2□□□□□ -0.78
TPM1-212ENST00000558347 MPP3Q13368 585 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 C1orf61Q13536 156 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 INPP5AQ14642 412 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 TBCCQ15814 346 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 DEFB133Q30KQ1 61 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 PRRT3Q5FWE3 981 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 RALGPS1Q5JS13 557 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 STEAP4Q687X5 459 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 ZNF449Q6P9G9 518 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 DPPA4Q7L190 304 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 LINC00523Q86TU6 105 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 CCNJLQ8IV13 435 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 ARHGAP24Q8N264 748 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 TEX9Q8N6V9 391 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 PAF1Q8N7H5 531 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 PPM1NQ8N819 430 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 FAM181AQ8N9Y4 354 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 ACMSDQ8TDX5 336 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 THOC1Q96FV9 657 aaKnown RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 OXNAD1Q96HP4 312 aaPredicted RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 FAM111AQ96PZ2 611 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 SRPK1Q96SB4 655 aaKnown RBP10.2□□□□□ -0.78
TPM1-212ENST00000558347 BTBD10Q9BSF8 475 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 APOOQ9BUR5 198 aa10.2□□□□□ -0.78
TPM1-212ENST00000558347 LRRC61Q9BV99 259 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms