RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PKP3Q9Y446 797 aa6□□□□□ -1.45
RTF1-204ENST00000558117 ADAMTS9Q9P2N4 1935 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 KIR2DS5A0A0G2JLQ3 304 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 NPIPB13A6NJU9 1138 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 NPIPB5A8MRT5 1133 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 KCNJ18B7U540 433 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 NPIPB4C9JG80 1138 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 KIR2DS3K7RE56 304 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 CHADO15335 359 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 DIAPH2O60879 1101 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 DHRS4L1P0CG22 281 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 PSG1P11464 419 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 ACP5P13686 325 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 HSD17B4P51659 736 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 BIRC3Q13489 604 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 SMTNL2Q2TAL5 461 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 LINC00303Q3SY05 128 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 MANEAQ5SRI9 462 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 C10orf76Q5T2E6 689 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 LIN9Q5TKA1 542 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 LYSMD4Q5XG99 296 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 AWAT2Q6E213 333 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 ISM2Q6H9L7 571 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 CYB5R4Q7L1T6 521 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 PDILTQ8N807 584 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 PTGR2Q8N8N7 351 aaPredicted RBP5.99□□□□□ -1.45
RTF1-204ENST00000558117 OLIG1Q8TAK6 271 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 TCEAL4Q96EI5 215 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 B3GALT6Q96L58 329 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 INPP4AQ96PE3 977 aaPredicted RBP5.99□□□□□ -1.45
RTF1-204ENST00000558117 PCYT2Q99447 389 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 MEIS3Q99687 375 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 TMEM175Q9BSA9 504 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 SMARCAD1Q9H4L7 1026 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 CHODLQ9H9P2 273 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 TRPV4Q9HBA0 871 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 SLC22A11Q9NSA0 550 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 ARL15Q9NXU5 204 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 GTSE1Q9NYZ3 720 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 TNFSF13BQ9Y275 285 aa5.99□□□□□ -1.45
RTF1-204ENST00000558117 TNRC6BQ9UPQ9 1833 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 HEPACAM2A8MVW5 462 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 HNRNPRO43390 633 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 NMT2O60551 498 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 CCND2P30279 289 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 ACTN2P35609 894 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 AARSP49588 968 aaKnown RBP eCLIP5.98□□□□□ -1.45
RTF1-204ENST00000558117 GEMIN4P57678 1058 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 RHAGQ02094 409 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 FCHO2Q0JRZ9 810 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 DMC1Q14565 340 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 SPDYCQ5MJ68 293 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 SLC30A9Q6PML9 568 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 B4GALNT4Q76KP1 1039 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 RNF144BQ7Z419 303 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 FTSJ3Q8IY81 847 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 TMEM217Q8N7C4 229 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 FRMD1Q8N878 549 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 ENDOVQ8N8Q3 282 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 C1orf131Q8NDD1 294 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 ZNF248Q8NDW4 579 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 PPHLN1Q8NEY8 458 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 SETD7Q8WTS6 366 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 NSMCE1Q8WV22 266 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 THAP4Q8WY91 577 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 SEPT1Q8WYJ6 367 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 NAF1Q96HR8 494 aaKnown RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 MPP4Q96JB8 637 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 FRMD8Q9BZ67 464 aaPredicted RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 TWSG1Q9GZX9 223 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 CLPBQ9H078 707 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 SEMA4BQ9NPR2 832 aaPredicted RBP5.98□□□□□ -1.45
RTF1-204ENST00000558117 THSD1Q9NS62 852 aa5.98□□□□□ -1.45
RTF1-204ENST00000558117 VWA8A3KMH1 1905 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 TCRBV7S3A2A0A539 114 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 B4DGG1 531 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 K7ENP7 123 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 RHODO00212 210 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 MSI1O43347 362 aaKnown RBP5.97□□□□□ -1.45
RTF1-204ENST00000558117 FIBPO43427 364 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 RNASEH2AO75792 299 aaKnown RBP5.97□□□□□ -1.45
RTF1-204ENST00000558117 EGFP01133 1207 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 CSF1P09603 554 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 PKMP14618 531 aaKnown RBP5.97□□□□□ -1.45
RTF1-204ENST00000558117 PTMSP20962 102 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 P2RY2P41231 377 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 CCR2P41597 374 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 CCT5P48643 541 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 CLDN6P56747 220 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 DDX10Q13206 875 aaKnown RBP5.97□□□□□ -1.45
RTF1-204ENST00000558117 SEMA3AQ14563 771 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 INPP5JQ15735 1006 aaPredicted RBP5.97□□□□□ -1.45
RTF1-204ENST00000558117 PIK3CD-AS1Q5SR53 167 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 HYIQ5T013 277 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 INO80CQ6PI98 192 aaPredicted RBP5.97□□□□□ -1.45
RTF1-204ENST00000558117 RINLQ6ZS11 566 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 TRAPPC11Q7Z392 1133 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 ANKS1BQ7Z6G8 1248 aa5.97□□□□□ -1.45
RTF1-204ENST00000558117 ARID3BQ8IVW6 561 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms