RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 USP28Q96RU2 1077 aa6.77□□□□□ -1.33
LINC00640-204ENST00000557295 RBM15Q96T37 977 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC00640-204ENST00000557295 PSMB7Q99436 277 aa6.77□□□□□ -1.33
LINC00640-204ENST00000557295 EFHD1Q9BUP0 239 aa6.77□□□□□ -1.33
LINC00640-204ENST00000557295 MIS12Q9H081 205 aa6.77□□□□□ -1.33
LINC00640-204ENST00000557295 GPN2Q9H9Y4 310 aaPredicted RBP6.77□□□□□ -1.33
LINC00640-204ENST00000557295 VPS51Q9UID3 782 aa6.77□□□□□ -1.33
LINC00640-204ENST00000557295 NBASA2RRP1 2371 aa6.77□□□□□ -1.33
LINC00640-204ENST00000557295 IGHV5-10-1A0A0J9YXX1 117 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CCDC154A6NI56 674 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 EFCAB7A8K855 629 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 FAM171A2A8MVW0 826 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MKRN2OSH3BPM6 223 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 K7EM74 188 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 AREL1O15033 823 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 DUX1O43812 170 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CALUO43852 315 aaPredicted RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 SNAP91O60641 907 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ZRANB2O95218 330 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 LY86O95711 162 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 TRUB2O95900 331 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MYL1P05976 194 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 PAEPP09466 180 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MED14OSP0DP75 135 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 PRKAR1AP10644 381 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CTSEP14091 401 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ZNF28P17035 718 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 NR2F2P24468 414 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 OAS2P29728 719 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ECHS1P30084 290 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CCR1P32246 355 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 PSMC2P35998 433 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MXI1P50539 228 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CDH4P55283 916 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 YWHAEP62258 255 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MC1RQ01726 317 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MEF2AQ02078 507 aaPredicted RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 TOP3AQ13472 1001 aaPredicted RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CUL4BQ13620 913 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ARHGEF7Q14155 803 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 USP10Q14694 798 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 RABEP1Q15276 862 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 DEFB109BQ30KR1 87 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MAP9Q49MG5 647 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 C14orf28Q4W4Y0 310 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ZMAT1Q5H9K5 638 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 SHC4Q6S5L8 630 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ASB18Q6ZVZ8 466 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 USP45Q70EL2 814 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 PIM3Q86V86 326 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 REXO1L1PQ8IX06 675 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 RHOT1Q8IXI2 618 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 SRRM1Q8IYB3 904 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CCDC13Q8IYE1 715 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 FAM186BQ8IYM0 893 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 PCDH20Q8N6Y1 951 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CPT1CQ8TCG5 803 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 SNX21Q969T3 373 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 TSACCQ96A04 125 aaPredicted RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 KIAA1143Q96AT1 154 aaPredicted RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ARHGEF26Q96DR7 871 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 LCORQ96JN0 433 aaPredicted RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 HEPHQ9BQS7 1158 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 ZSWIM1Q9BR11 485 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 C1QTNF7Q9BXJ2 289 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 SPRY4Q9C004 299 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MMRN2Q9H8L6 949 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 DMRT3Q9NQL9 472 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 MBNL1Q9NR56 388 aaKnown RBP6.76□□□□□ -1.33
LINC00640-204ENST00000557295 LRIT1Q9P2V4 623 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 PILRAQ9UKJ1 303 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 DGKBQ9Y6T7 804 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 C2CD3Q4AC94 2353 aa6.76□□□□□ -1.33
LINC00640-204ENST00000557295 CXorf51AA0A1B0GTR3 108 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 C16orf96A6NNT2 1141 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 B4E171 279 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 M0QYV0 167 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 POLR2DO15514 142 aaKnown RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 B4GAT1O43505 415 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 KLRC4O43908 158 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 NUAK1O60285 661 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 STX10O60499 249 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 PPP6R2O75170 966 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 KLHL18O94889 574 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 LTA4HP09960 611 aaKnown RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 NR1D1P20393 614 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 LPOP22079 712 aaPredicted RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 HTR1BP28222 390 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 GNALP38405 381 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 TSPAN7P41732 249 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 SERPINH1P50454 418 aaKnown RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 CCNHP51946 323 aaPredicted RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 SRP54P61011 504 aaKnown RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 YWHAZP63104 245 aaKnown RBP6.75□□□□□ -1.33
LINC00640-204ENST00000557295 SLC20A2Q08357 652 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 NR1D2Q14995 579 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 PCOLCEQ15113 449 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 PGS1Q32NB8 556 aa6.75□□□□□ -1.33
LINC00640-204ENST00000557295 EDRF1Q3B7T1 1238 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms