RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 H0YCG3 227 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 IPO5O00410 1097 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FCHO1O14526 889 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 DNALI1O14645 258 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 TM9SF1O15321 606 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FFAR2O15552 330 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 SKAP2O75563 359 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 PROSCO94903 275 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 LYPLA2O95372 231 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GH1P01241 217 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 IL1BP01584 269 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 POLR2MP0CAP2 368 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CD53P19397 219 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CA4P22748 312 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FOXN2P32314 431 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GALNSP34059 522 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CHKAP35790 457 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 HALP42357 657 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 NSFP46459 744 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GCLMP48507 274 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 PAPOLAP51003 745 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 RAE1P78406 368 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GTF2BQ00403 316 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GCNT1Q02742 428 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 SLC14A1Q13336 389 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 SNX1Q13596 522 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 COG2Q14746 738 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 KPNB1Q14974 876 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 MORF4L2Q15014 288 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ETFDHQ16134 617 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 SLC5A9Q2M3M2 681 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 KLHL38Q2WGJ6 581 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CEP55Q53EZ4 464 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 TMTC4Q5T4D3 741 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 C6orf163Q5TEZ5 329 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 DAB2IPQ5VWQ8 1189 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FAM91A1Q658Y4 838 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ANO7Q6IWH7 933 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CENPUQ71F23 418 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 NIPA1Q7RTP0 329 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 NLRP9Q7RTR0 991 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GSTA5Q7RTV2 222 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 RCOR2Q8IZ40 523 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 MCOLN2Q8IZK6 566 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 GALNT15Q8N3T1 639 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 C9orf106Q8NAJ2 232 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ZNF527Q8NB42 609 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FBXL13Q8NEE6 735 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 EXD1Q8NHP7 514 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 TEKT4Q8WW24 435 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 IGFBPL1Q8WX77 278 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 STMN2Q93045 179 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 MCUR1Q96AQ8 359 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 BICD1Q96G01 975 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 RBM41Q96IZ5 413 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 VCPIP1Q96JH7 1222 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ZNF333Q96JL9 665 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 NR1H4Q96RI1 486 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 PAIP2Q9BPZ3 127 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 LXNQ9BS40 222 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ZNF577Q9BSK1 485 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FAM167BQ9BTA0 163 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CINPQ9BW66 212 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 TBC1D10AQ9BXI6 508 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 EIF2AQ9BY44 585 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FRMD8P1Q9BZ68 369 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 TMEM39BQ9GZU3 492 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 UNC45AQ9H3U1 944 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 VPS45Q9NRW7 570 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 FBXO28Q9NVF7 368 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 IL1RAPL1Q9NZN1 696 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 WRAP73Q9P2S5 460 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 HAO1Q9UJM8 370 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ANAPC7Q9UJX3 599 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 ANGPTL2Q9UKU9 493 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 SLC39A10Q9ULF5 831 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 MAGED2Q9UNF1 606 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 CHKBQ9Y259 395 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 MRPL11Q9Y3B7 192 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 RBBP6Q7Z6E9 1792 aaKnown RBP4.77□□□□□ -1.65
ATXN3-246ENST00000557030 DPPA5A6NC42 116 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 KCNU1A8MYU2 1149 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 HNRNPDLO14979 420 aaKnown RBP4.76□□□□□ -1.65
ATXN3-246ENST00000557030 ALOX15BO15296 676 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 CHMP2AO43633 222 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 CIB2O75838 187 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 RNF8O76064 485 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 TGDSO95455 350 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 VIPP01282 170 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 LINGO3P0C6S8 592 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 TMIGD3P0DMS9 266 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-246ENST00000557030 SP100P23497 879 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-246ENST00000557030 RRM1P23921 792 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 ATP5F1P24539 256 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-246ENST00000557030 KLRC2P26717 231 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 SLC5A2P31639 672 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 PEX19P40855 299 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 HSD17B4P51659 736 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 STAT2P52630 851 aa4.76□□□□□ -1.65
ATXN3-246ENST00000557030 ARL4CP56559 192 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms