RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 CCDC70Q6NSX1 233 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 IRGCQ6NXR0 463 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 FAM199XQ6PEV8 388 aaPredicted RBP6.22□□□□□ -1.41
LGMN-213ENST00000556790 RANBP10Q6VN20 620 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 TMEM26Q6ZUK4 368 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 ARHGAP22Q7Z5H3 698 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 SLC9B2Q86UD5 537 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 VSIG1Q86XK7 387 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 PTRH1Q86Y79 214 aaKnown RBP6.22□□□□□ -1.41
LGMN-213ENST00000556790 TMTC1Q8IUR5 882 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 TMEM151BQ8IW70 566 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 CACNA2D3Q8IZS8 1091 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 IL22RA1Q8N6P7 574 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 PHC3Q8NDX5 983 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 OR10G6Q8NH81 332 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 ZNF398Q8TD17 642 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 C1orf54Q8WWF1 131 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 RTP4Q96DX8 246 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 OR6C1Q96RD1 312 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 TAAR9Q96RI9 348 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 TBL1YQ9BQ87 522 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 TMEM121Q9BTD3 319 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 ASB8Q9H765 288 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 SARS2Q9NP81 518 aaKnown RBP6.22□□□□□ -1.41
LGMN-213ENST00000556790 IMP3Q9NV31 184 aaKnown RBP6.22□□□□□ -1.41
LGMN-213ENST00000556790 KCTD5Q9NXV2 234 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 SLC2A6Q9UGQ3 507 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 LCMT1Q9UIC8 334 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 PIKFYVEQ9Y2I7 2098 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 FLNCQ14315 2725 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 SNRNP200O75643 2136 aaKnown RBP6.22□□□□□ -1.41
LGMN-213ENST00000556790 COL6A6A6NMZ7 2263 aa6.22□□□□□ -1.41
LGMN-213ENST00000556790 PRRC2CQ9Y520 2896 aaKnown RBP6.21□□□□□ -1.41
LGMN-213ENST00000556790 RGSL1A5PLK6 1076 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 CYSRT1A8MQ03 144 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 HACD1B0YJ81 288 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 STMND1H3BQB6 276 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 K7EM74 188 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 ERVH48-1M5A8F1 160 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 LDB2O43679 373 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 SRP72O76094 671 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 STK17BO94768 372 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 PYGLP06737 847 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 CTSBP07858 339 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 EBLN1P0CF75 366 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 FOLR1P15328 257 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 ITGB6P18564 788 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 XRCC1P18887 633 aaPredicted RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 HLA-DPA1P20036 260 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 IDSP22304 550 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 MC4RP32245 332 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 PREPP48147 710 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 ZNF140P52738 457 aaPredicted RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 GEMP55040 296 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 CSE1LP55060 971 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 FOXL2P58012 376 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 RPS18P62269 152 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 GPLD1P80108 840 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 EIF3IQ13347 325 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 KLF1Q13351 362 aaPredicted RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 MPP3Q13368 585 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 GTF2H3Q13889 308 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 ZRANB3Q5FWF4 1079 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 C16orf46Q6P387 395 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 BZW1Q7L1Q6 419 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 PEX26Q7Z412 305 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 LDB1Q86U70 411 aaPredicted RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 CDKL3Q8IVW4 592 aaPredicted RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 FAM20CQ8IXL6 584 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 PIANPQ8IYJ0 282 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 CFAP206Q8IYR0 622 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 CLDN19Q8N6F1 224 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 GALNT6Q8NCL4 622 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 DDHD1Q8NEL9 900 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 OR52K1Q8NGK4 314 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 GRAMD1AQ96CP6 724 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 CXorf40BQ96DE9 158 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 C9orf72Q96LT7 481 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 RMDN2Q96LZ7 410 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 C12orf66Q96MD2 445 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 ZNF778Q96MU6 729 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 SPATA13Q96N96 652 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 TTC25Q96NG3 672 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 VPS35Q96QK1 796 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 MAP3K3Q99759 626 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 TIMM29Q9BSF4 260 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 SLC12A9Q9BXP2 914 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 SPRY4Q9C004 299 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 XKR8Q9H6D3 395 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 RMI1Q9H9A7 625 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 SLC40A1Q9NP59 571 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 HAUS2Q9NVX0 235 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 SIDT1Q9NXL6 827 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.21□□□□□ -1.42
LGMN-213ENST00000556790 NFKBIL1Q9UBC1 381 aaPredicted RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 TSR3Q9UJK0 312 aaKnown RBP6.21□□□□□ -1.42
LGMN-213ENST00000556790 PILRAQ9UKJ1 303 aa6.21□□□□□ -1.42
LGMN-213ENST00000556790 AMFRQ9UKV5 643 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms