RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 COPS8Q99627 209 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 DPEP2Q9H4A9 486 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SYBUQ9NX95 663 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 ZDHHC3Q9NYG2 299 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 KCNK6Q9Y257 313 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 DNMT3AQ9Y6K1 912 aaPredicted RBP9.5□□□□□ -0.89
SRP54-210ENST00000556380 SLC30A1Q9Y6M5 507 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 RNF215Q9Y6U7 377 aa9.5□□□□□ -0.89
SRP54-210ENST00000556380 SDR42E2A6NKP2 422 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 B4DGG1 531 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 NTN3O00634 580 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 DNALI1O14645 258 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 PPM1DO15297 605 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 TTI1O43156 1089 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 NUDT21O43809 227 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 KCNJ13O60928 360 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 GOT2P00505 430 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 BRAFP15056 766 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 GLB1P16278 677 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 SPINK2P20155 84 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 MSH3P20585 1137 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 NMBRP28336 390 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 ARCN1P48444 511 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 MAZP56270 477 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 CLDN6P56747 220 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 SARNPP82979 210 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 DR1Q01658 176 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 DMPKQ09013 629 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 CBLBQ13191 982 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 DHX34Q14147 1143 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 NR1D2Q14995 579 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 BCL7AQ4VC05 210 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 CCDC157Q569K6 752 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 AGAP9Q5VTM2 703 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 MRPL14Q6P1L8 145 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 ABRAXAS1Q6UWZ7 409 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 WASH2PQ6VEQ5 465 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 PACS1Q6VY07 963 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 CCNI2Q6ZMN8 369 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 FAM83HQ6ZRV2 1179 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 MARCH9Q86YJ5 346 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 PPIL6Q8IXY8 311 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 SFRP1Q8N474 314 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 OR6C4Q8NGE1 309 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 OR4L1Q8NH43 312 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 NAT6Q93015 286 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 MFSD3Q96ES6 412 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 ZNF514Q96K75 400 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 LINC00615Q96LM1 132 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 C16orf45Q96MC5 204 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 FCRL3Q96P31 734 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 KRT12Q99456 494 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 SCNM1Q9BWG6 230 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 ZCCHC2Q9C0B9 1178 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 XAB2Q9HCS7 855 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 PRDM8Q9NQV8 689 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 KLC4Q9NSK0 619 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 MARCH4Q9P2E8 410 aaPredicted RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 CRLS1Q9UJA2 301 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 CDC23Q9UJX2 597 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 KLK13Q9UKR3 277 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 NEUROG3Q9Y4Z2 214 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 APC2O95996 2303 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 ZNF106Q9H2Y7 1883 aaKnown RBP9.49□□□□□ -0.89
SRP54-210ENST00000556380 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
SRP54-210ENST00000556380 MYLKQ15746 1914 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 PLXNB3Q9ULL4 1909 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 A0A1W2PQM1 296 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 MAGEB16A2A368 324 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 MGAT4DA6NG13 374 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 OR2AG2A6NM03 316 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 GOLGA8MH3BSY2 632 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 ZZEF1O43149 2961 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 B4GAT1O43505 415 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 MT-CO3P00414 261 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 TUBB4AP04350 444 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 F3P13726 295 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 ATP1B2P14415 290 aaPredicted RBP9.48□□□□□ -0.89
SRP54-210ENST00000556380 FASLGP48023 281 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 UBE2IP63279 158 aaKnown RBP9.48□□□□□ -0.89
SRP54-210ENST00000556380 MRPS25P82663 173 aaKnown RBP9.48□□□□□ -0.89
SRP54-210ENST00000556380 GTF2H3Q13889 308 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 SEMA3AQ14563 771 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 ITIH4Q14624 930 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 ZRANB3Q5FWF4 1079 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 FNBP1LQ5T0N5 605 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 METRNLQ641Q3 311 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 AFTPHQ6ULP2 937 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 CES3Q6UWW8 571 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 DET1Q7L5Y6 550 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 PCGF5Q86SE9 256 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 TMEM135Q86UB9 458 aa9.48□□□□□ -0.89
SRP54-210ENST00000556380 HOOK3Q86VS8 718 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms