RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TSPAN17Q96FV3 270 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF778Q96MU6 729 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 NELL2Q99435 816 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 GPR22Q99680 433 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 PIDD1Q9HB75 910 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 NOD2Q9HC29 1040 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SNX15Q9NRS6 342 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 TDP1Q9NUW8 608 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 HCFC1R1Q9NWW0 138 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ZDHHC7Q9NXF8 308 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 IL1RAPL1Q9NZN1 696 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 HACD3Q9P035 362 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 TBC1D14Q9P2M4 693 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SLC17A6Q9P2U8 582 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 DNMT3BQ9UBC3 853 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SLC2A6Q9UGQ3 507 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ADAM30Q9UKF2 790 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 FBXO5Q9UKT4 447 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 SLC39A10Q9ULF5 831 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 MAPRE3Q9UPY8 281 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 MTO1Q9Y2Z2 717 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 ACOT9Q9Y305 439 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 OR51B4Q9Y5P0 310 aa6.79□□□□□ -1.32
SLIRP-204ENST00000555890 FLNAP21333 2647 aaKnown RBP6.79□□□□□ -1.32
SLIRP-204ENST00000555890 A0A087X1B8 175 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 FAM95CA0A1B0GW59 222 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 CHURC1-FNTBB4DL54 471 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 GOLGA8TH3BQL2 631 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 SLC9A3R1O14745 358 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 PLD2O14939 933 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 MUSKO15146 869 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 PFDN6O15212 129 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TPD52L2O43399 206 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 LDB2O43679 373 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 SNAP91O60641 907 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 PLIN3O60664 434 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 RPP40O75818 363 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TMCC1O94876 653 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TGDSO95455 350 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 IL1BP01584 269 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 AHSGP02765 367 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 C2P06681 752 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 BPGMP07738 259 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 RHOP08100 348 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 NAT2P11245 290 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 BMP4P12644 408 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 STMN1P16949 149 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 BGNP21810 368 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 GRK2P25098 689 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 EIF2S3P41091 472 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 SLC1A2P43004 574 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 MAGEA12P43365 314 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 LEPRP48357 1165 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 CSNK1DP48730 415 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 FNTBP49356 437 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 KPNA2P52292 529 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 AP1S1P61966 158 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 CXADRP78310 365 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TMPRSS15P98073 1019 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ZXDBP98169 803 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 NFKB2Q00653 900 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 POU4F1Q01851 419 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 NFATC3Q12968 1075 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 STX3Q13277 289 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 CTBP1Q13363 440 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 MSLNQ13421 630 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 GALNT3Q14435 633 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 DMC1Q14565 340 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 IHHQ14623 411 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 GRM3Q14832 879 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 SETDB1Q15047 1291 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TEAD2Q15562 447 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TAF1AQ15573 450 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 SMAD1Q15797 465 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 FNDC3BQ53EP0 1204 aaKnown RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF470Q6ECI4 717 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 MRNIPQ6NTE8 343 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 NCEH1Q6PIU2 408 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 LINGO4Q6UY18 593 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 CDHR3Q6ZTQ4 885 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TPGS1Q6ZTW0 290 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 OTOAQ7RTW8 1153 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 GALNT7Q86SF2 657 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 LONP2Q86WA8 852 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 PAF1Q8N7H5 531 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 C2CD4AQ8NCU7 369 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 LPCAT1Q8NF37 534 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 RDH11Q8TC12 318 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ZNF398Q8TD17 642 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 KISS1RQ969F8 398 aaPredicted RBP6.78□□□□□ -1.32
SLIRP-204ENST00000555890 HDAC10Q969S8 669 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 OTUB2Q96DC9 234 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ALG14Q96F25 216 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ATXN7L3BQ96GX2 97 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 ELMO2Q96JJ3 720 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TRIB3Q96RU7 358 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 MCMBPQ9BTE3 642 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TSSK1BQ9BXA7 367 aa6.78□□□□□ -1.32
SLIRP-204ENST00000555890 TDRD1Q9BXT4 1180 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms