RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 HNRNPKP61978 463 aaKnown RBP eCLIP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 CASP8Q14790 479 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 TRIM61Q5EBN2 209 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 HECTD2Q5U5R9 776 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 LAYNQ6UX15 382 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 RD3Q7Z3Z2 195 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 C11orf96Q7Z7L8 435 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 PHACTR4Q8IZ21 702 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 RIBC1Q8N443 379 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 GPATCH11Q8N954 259 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 OR2L2Q8NH16 312 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 TSPAN17Q96FV3 270 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 PDXPQ96GD0 296 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 OR2M4Q96R27 311 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 ELF4Q99607 663 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 GPR22Q99680 433 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 MRPL40Q9NQ50 206 aaKnown RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 DNAJC28Q9NX36 388 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 PSMC3IPQ9P2W1 217 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 MTO1Q9Y2Z2 717 aaKnown RBP12.27□□□□□ -0.45
SHMT2-221ENST00000555773 SNX11Q9Y5W9 270 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 EML5Q05BV3 1969 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 THADAQ6YHU6 1953 aa12.27□□□□□ -0.45
SHMT2-221ENST00000555773 PLXNA2O75051 1894 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 FAM95CA0A1B0GW59 222 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ARHGAP33O14559 1287 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 LIN7AO14910 233 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-221ENST00000555773 YKT6O15498 198 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 LRP3O75074 770 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 CTSEP14091 401 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 AOAHP28039 575 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ARHGAP8P85298 464 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 BNC1Q01954 994 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 DMPKQ09013 629 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.45
SHMT2-221ENST00000555773 RPA4Q13156 261 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 USP10Q14694 798 aaKnown RBP12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ELOCQ15369 112 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF423Q2M1K9 1284 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 MROH9Q5TGP6 573 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 CRTC3Q6UUV7 619 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 TIFABQ6ZNK6 161 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 CHST15Q7LFX5 561 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-221ENST00000555773 OTOAQ7RTW8 1153 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 CCDC91Q7Z6B0 441 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 FSTL5Q8N475 847 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-221ENST00000555773 OR2W6PQ8NHA6 318 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 GPBAR1Q8TDU6 330 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ASZ1Q8WWH4 475 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ANKRD7Q92527 254 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 INPP5DQ92835 1189 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ELMO2Q96JJ3 720 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 VIPAS39Q9H9C1 493 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 POPDC3Q9HBV1 291 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 SPASTQ9UBP0 616 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 KLF15Q9UIH9 416 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 ACSL5Q9ULC5 683 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 SLC39A10Q9ULF5 831 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 PNMA8BQ9ULN7 279 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-221ENST00000555773 DHRS7Q9Y394 339 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 PRKAB1Q9Y478 270 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 DOCK9Q9BZ29 2069 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 MUC6Q6W4X9 2439 aa12.26□□□□□ -0.45
SHMT2-221ENST00000555773 SPAG17Q6Q759 2223 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 TLDC2A0PJX2 215 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 HMX2A2RU54 273 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 IQCF5A8MTL0 148 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 PROB1E7EW31 1015 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 DYNC1I1O14576 645 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 FOXD2O60548 495 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 NIPSNAP2O75323 286 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 APOA4P06727 396 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 F7P08709 466 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 ACP5P13686 325 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 STMN1P16949 149 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 FDXRP22570 491 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 CRABP2P29373 138 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 CCR7P32248 378 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 ABCG1P45844 678 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 CLCN7P51798 805 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 IRX4P78413 519 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 CTBSQ01459 385 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 GRIK2Q13002 908 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 TMED2Q15363 201 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 INSCQ1MX18 579 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 HLA-BQ31612 363 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 TTLL9Q3SXZ7 439 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF542PQ5EBM4 170 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 PLEKHS1Q5SXH7 462 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 RBM20Q5T481 1227 aaKnown RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 METRNLQ641Q3 311 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 KCTD16Q68DU8 428 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 CFAP206Q8IYR0 622 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 KRT222Q8N1A0 295 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 DCLK2Q8N568 766 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 BEND7Q8N7W2 519 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 HM13Q8TCT9 377 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms