RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PDCL3Q9H2J4 239 aa8.93□□□□□ -0.98
PRKCH-218ENST00000555628 STN1Q9H668 368 aaKnown RBP8.93□□□□□ -0.98
PRKCH-218ENST00000555628 SP110Q9HB58 689 aa8.93□□□□□ -0.98
PRKCH-218ENST00000555628 GPATCH2LQ9NWQ4 482 aa8.93□□□□□ -0.98
PRKCH-218ENST00000555628 MDC1Q14676 2089 aaKnown RBP8.93□□□□□ -0.98
PRKCH-218ENST00000555628 SVILO95425 2214 aa8.93□□□□□ -0.98
PRKCH-218ENST00000555628 IGHV5-51A0A0C4DH38 117 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 A0A0J9YYE9 177 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 GOLGA6CA6NDK9 693 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 GOLGA6BA6NDN3 693 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 NUAK1O60285 661 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 FGFR1OPO95684 399 aaKnown RBP8.92□□□□□ -0.98
PRKCH-218ENST00000555628 PRLP01236 227 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 TRBC1P01850 177 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 PYGLP06737 847 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 GOLGA6DP0CG33 693 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 CYP2A6P11509 494 aaPredicted RBP8.92□□□□□ -0.98
PRKCH-218ENST00000555628 SLC2A4P14672 509 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 CTPS1P17812 591 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 ERCC2P18074 760 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 HNRNPH3P31942 346 aaKnown RBP8.92□□□□□ -0.98
PRKCH-218ENST00000555628 RORAP35398 523 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 RENBPP51606 427 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 JAM2P57087 298 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 TUBB3Q13509 450 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 MAN2A1Q16706 1144 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 ALG1LQ6GMV1 187 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 CERS6Q6ZMG9 384 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 C20orf204Q6ZNR8 217 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 RFX8Q6ZV50 586 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 USP45Q70EL2 814 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 RAVER1Q8IY67 606 aaKnown RBP8.92□□□□□ -0.98
PRKCH-218ENST00000555628 CISD2Q8N5K1 135 aaKnown RBP8.92□□□□□ -0.98
PRKCH-218ENST00000555628 LZTR1Q8N653 840 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 ZBTB2Q8N680 514 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 EXD1Q8NHP7 514 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 UBE2Q2Q8WVN8 375 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 LRFN5Q96NI6 719 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 STK33Q9BYT3 514 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 NDST4Q9H3R1 872 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 RMI1Q9H9A7 625 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 SLC40A1Q9NP59 571 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 GOLGA6AQ9NYA3 693 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 SLC23A2Q9UGH3 650 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 ZNHIT2Q9UHR6 403 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 FARSAQ9Y285 508 aaKnown RBP8.92□□□□□ -0.98
PRKCH-218ENST00000555628 B3GNT3Q9Y2A9 372 aa8.92□□□□□ -0.98
PRKCH-218ENST00000555628 CNTRLQ7Z7A1 2325 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 EIF3CLB5ME19 914 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 CHUKO15111 745 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 EPHB6O15197 1021 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 MAFKO60675 156 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 SNX2O60749 519 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 TMEM63AO94886 807 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 HSP90AA1P07900 732 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 RAB40ALP0C0E4 278 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 ZNF30P17039 623 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 HSPA9P38646 679 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 NOP2P46087 812 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 GPR18Q14330 331 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 ZNF789Q5FWF6 425 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 RALGPS1Q5JS13 557 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 CACHD1Q5VU97 1274 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 TRIM72Q6ZMU5 477 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 Q6ZS92 163 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 FAM92BQ6ZTR7 304 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 ZNF547Q8IVP9 402 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 ST6GALNAC3Q8NDV1 305 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 ZNF514Q96K75 400 aaPredicted RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 LURAP1Q96LR2 239 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 MCEEQ96PE7 176 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 LYSMD1Q96S90 227 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 SNRNP25Q9BV90 132 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 CARD9Q9H257 536 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 CHST8Q9H2A9 424 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 FAM207AQ9NSI2 230 aaPredicted RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 DNAJB12Q9NXW2 375 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 DTLQ9NZJ0 730 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 C5AR2Q9P296 337 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 HOOK1Q9UJC3 728 aaKnown RBP8.91□□□□□ -0.98
PRKCH-218ENST00000555628 TCFL5Q9UL49 500 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 AP4E1Q9UPM8 1137 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 ATP6V1DQ9Y5K8 247 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 NUP210LQ5VU65 1888 aa8.91□□□□□ -0.98
PRKCH-218ENST00000555628 MAP1AP78559 2803 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-218ENST00000555628 DFFAO00273 331 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 EEF2KO00418 725 aaKnown RBP8.9□□□□□ -0.98
PRKCH-218ENST00000555628 ZNF185O15231 689 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 GRID2O43424 1007 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 ZG16O60844 167 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 CPNE3O75131 537 aaKnown RBP8.9□□□□□ -0.98
PRKCH-218ENST00000555628 RASSF9O75901 435 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 JCHAINP01591 159 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 EBLN1P0CF75 366 aa8.9□□□□□ -0.98
PRKCH-218ENST00000555628 ZNF8P17098 575 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-218ENST00000555628 ITGA3P26006 1051 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms