RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 CAMTA2O94983 1202 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 HNRNPCL4P0DMR1 293 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 MC5RP33032 325 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 RAD23AP54725 363 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 SEC61A1P61619 476 aaKnown RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 RELQ04864 619 aaPredicted RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 SF3B4Q15427 424 aaKnown RBP eCLIP4.52□□□□□ -1.698e-11■■■□□ 14.9
KTN1-223ENST00000555573 CRY2Q49AN0 593 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 TCP11X2Q5H9J9 407 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 SPECC1Q5M775 1068 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 C6orf163Q5TEZ5 329 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 CREB3L2Q70SY1 520 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 TMEM219Q86XT9 240 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 ZNF595Q8IYB9 648 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 C1orf52Q8N6N3 182 aaKnown RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 OR52I2Q8NH67 350 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 LILRB1Q8NHL6 650 aaPredicted RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 UBE2Q2Q8WVN8 375 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 SECISBP2LQ93073 1101 aaKnown RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 OLFM1Q99784 485 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 TMEM204Q9BSN7 226 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 GPR88Q9GZN0 384 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 OLAHQ9NV23 265 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 ZNF541Q9H0D2 1346 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 OR2M5A3KFT3 312 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 TO15178 435 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 PRAMEF11O60813 436 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 NTN1O95631 604 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 HLA-DOBP13765 273 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 EEF1DP29692 281 aaKnown RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 GABRA5P31644 462 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 ZNF234Q14588 700 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 Q8NFD4 153 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 BBS10Q8TAM1 723 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 RMDN1Q96DB5 314 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 ADGRG7Q96K78 797 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 PRMT6Q96LA8 375 aaPredicted RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 NEK1Q96PY6 1258 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 C16orf70Q9BSU1 422 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 LRMDAQ9H2I8 198 aa4.52□□□□□ -1.69
KTN1-223ENST00000555573 MBNL1Q9NR56 388 aaKnown RBP4.52□□□□□ -1.69
KTN1-223ENST00000555573 OR5K3A6NET4 321 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 DIAPH2O60879 1101 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 LDB3O75112 727 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 TOMM70O94826 608 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 SLCO2B1O94956 709 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 C22orf31O95567 290 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 ZBTB11O95625 1053 aaPredicted RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 TRUB2O95900 331 aaKnown RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 GNL1P36915 607 aaPredicted RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 NANOS2P60321 138 aaKnown RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 TROAPQ12815 778 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 KIF5AQ12840 1032 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 GAGE2BQ13066 116 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 PSMD6Q15008 389 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 GAGE2EQ4V326 116 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 TMEM35AQ53FP2 167 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 KRT80Q6KB66 452 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 TRNP1Q6NT89 227 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 FIGLAQ6QHK4 219 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 SPATA2LQ8IUW3 424 aaPredicted RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 ZNF441Q8N8Z8 693 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 TSPAN14Q8NG11 270 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 PPP4R1Q8TF05 950 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 FIG4Q92562 907 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 SPACA9Q96E40 222 aaPredicted RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 ZNF582Q96NG8 517 aaPredicted RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 ZNF385AQ96PM9 386 aaKnown RBP4.51□□□□□ -1.69
KTN1-223ENST00000555573 ZPBPQ9BS86 351 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 ST6GALNAC4Q9H4F1 302 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 SLA2Q9H6Q3 261 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 RHCGQ9UBD6 479 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 GAGE2DQ9UEU5 116 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 VDAC3Q9Y277 283 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 CCL27Q9Y4X3 112 aa4.51□□□□□ -1.69
KTN1-223ENST00000555573 A0A0B4J293 547 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 HEPACAM2A8MVW5 462 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 HNRNPCL2B2RXH8 293 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 PROB1E7EW31 1015 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 SMAD6O43541 496 aaKnown RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 SSX4O60224 188 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 WDR1O75083 606 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 POLR2CP19387 275 aaPredicted RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 AMPHP49418 695 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 CSE1LP55060 971 aaKnown RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 DSCR9P59020 149 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 RALGDSQ12967 914 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 SNTA1Q13424 505 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 CAMK2DQ13557 499 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 ZNF704Q6ZNC4 412 aaPredicted RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 RBPMS2Q6ZRY4 209 aaKnown RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 KRT77Q7Z794 578 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 TMEM173Q86WV6 379 aaPredicted RBP4.5□□□□□ -1.69
KTN1-223ENST00000555573 GBGT1Q8N5D6 347 aa4.5□□□□□ -1.69
KTN1-223ENST00000555573 XXYLT1Q8NBI6 393 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms