RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MUC6Q6W4X9 2439 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CCDC163A0A0D9SF12 145 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 PRPF4O43172 522 aaKnown RBP eCLIP10.61□□□□□ -0.71
TDP1-211ENST00000555178 TRIM16O95361 564 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CEACAM5P06731 702 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 NSG1P42857 185 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CLCN7P51798 805 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 ADARP55265 1226 aaKnown RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 SFSWAPQ12872 951 aaKnown RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 DNAJC3Q13217 504 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CSHL1Q14406 222 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 ITIH4Q14624 930 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 N4BP2L1Q5TBK1 243 aaPredicted RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 CRTC3Q6UUV7 619 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 PHYKPLQ8IUZ5 450 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 CD200R1Q8TD46 325 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 ASB12Q8WXK4 309 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 TSACCQ96A04 125 aaPredicted RBP10.61□□□□□ -0.71
TDP1-211ENST00000555178 NXNL1Q96CM4 212 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 SPACA7Q96KW9 195 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 LRFN3Q9BTN0 628 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 GNPTGQ9UJJ9 305 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 FBXO4Q9UKT5 387 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
TDP1-211ENST00000555178 A0A1W2PR77 199 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 E5RI56 91 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 H3BMM5 538 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 ASMTLO95671 621 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 CCDC166P0CW27 439 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 ATP1B2P14415 290 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 ZNF37AP17032 561 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 MSH3P20585 1137 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 RPS3P23396 243 aaKnown RBP eCLIP10.6□□□□□ -0.71
TDP1-211ENST00000555178 DHPSP49366 369 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 CSNK1EP49674 416 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 PDAP1Q13442 181 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 CCDC6Q16204 474 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 LYPLAL1Q5VWZ2 237 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PMS2CLQ68D20 193 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 ABI3BPQ7Z7G0 1075 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 C11orf96Q7Z7L8 435 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 SPATS2Q86XZ4 545 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 CPNE9Q8IYJ1 553 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 ZBTB44Q8NCP5 570 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 CADM4Q8NFZ8 388 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 DTX3LQ8TDB6 740 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 DENND1AQ8TEH3 1009 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 SCG3Q8WXD2 468 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 OR1E3Q8WZA6 343 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 KCNJ9Q92806 393 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PDXPQ96GD0 296 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PAIP2Q9BPZ3 127 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 WDR26Q9H7D7 661 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TM9SF3Q9HD45 589 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 IGSF5Q9NSI5 407 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 CORO1CQ9ULV4 474 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 ARID1BQ8NFD5 2236 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 MEI4A8MW99 385 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PRR33A8MZF0 331 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PRAMEF26H0Y7S4 382 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TK2O00142 265 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 FPGTO14772 594 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PFDN6O15212 129 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 MPOP05164 745 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 CD27P26842 260 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PBLDP30039 288 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 CRHR1P34998 444 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 CBX1P83916 185 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 BNC1Q01954 994 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TAF1BQ53T94 588 aaPredicted RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 LVRNQ6Q4G3 990 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TMEM220Q6QAJ8 160 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 MACC1Q6ZN28 852 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 VRK3Q8IV63 474 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 SFTPA2Q8IWL1 248 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 RAVER1Q8IY67 606 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 RGL4Q8IZJ4 473 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 ARMC2Q8NEN0 867 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 CCL4L1Q8NHW4 92 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 ACMSDQ8TDX5 336 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 HEXDCQ8WVB3 486 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 DCUN1D1Q96GG9 259 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 GPR78Q96P69 363 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TTC1Q99614 292 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 MECRQ9BV79 373 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 SMOC1Q9H4F8 434 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TRIM39Q9HCM9 518 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 SSU72Q9NP77 194 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 AASDHPPTQ9NRN7 309 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TAS2R13Q9NYV9 303 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 TLK1Q9UKI8 766 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 RUVBL2Q9Y230 463 aaKnown RBP10.6□□□□□ -0.71
TDP1-211ENST00000555178 ACOT9Q9Y305 439 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PLLPQ9Y342 182 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 PCDHB1Q9Y5F3 818 aa10.6□□□□□ -0.71
TDP1-211ENST00000555178 WDR91A4D1P6 747 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 PATE3B3GLJ2 98 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 VPS26AO75436 327 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms