RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 LINC00597Q9H2U6 94 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 WDR41Q9HAD4 459 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 COMMD8Q9NX08 183 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 TUBA8Q9NY65 449 aaPredicted RBP11.04□□□□□ -0.64
SRP54-205ENST00000554803 CLIC5Q9NZA1 410 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 IPO11Q9UI26 975 aaKnown RBP11.04□□□□□ -0.64
SRP54-205ENST00000554803 RIMS3Q9UJD0 308 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 PTBP2Q9UKA9 531 aaKnown RBP11.04□□□□□ -0.64
SRP54-205ENST00000554803 AHCTF1Q8WYP5 2266 aa11.04□□□□□ -0.64
SRP54-205ENST00000554803 LRRK2Q5S007 2527 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 TRAV19A0A0A6YYK7 116 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 FAM149AA5PLN7 773 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 E9PBE3 544 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 ZNF701M0R085 212 aaPredicted RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 TLX3O43711 291 aaPredicted RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 KLHL41O60662 606 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 DNAJA2O60884 412 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 ADAM23O75077 832 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 PDE5AO76074 875 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 PIGNO95427 931 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 ZNF883P0CG24 379 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 TCF3P15923 654 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 SLC12A2P55011 1212 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 SMAD1Q15797 465 aaKnown RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 COQ5Q5HYK3 327 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 SAMD4BQ5PRF9 694 aaKnown RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 AGAP9Q5VTM2 703 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 BTBD8Q5XKL5 378 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 FAM45BPQ6NSW5 357 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 ARHGAP22Q7Z5H3 698 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 SPATA24Q86W54 205 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 SFTPA1Q8IWL2 248 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 TERB1Q8NA31 727 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 TTC16Q8NEE8 873 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 FAM45AQ8TCE6 357 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 HM13Q8TCT9 377 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 DQX1Q8TE96 717 aaKnown RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 TSPEARQ8WU66 669 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 ROPN1LQ96C74 230 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 HIC2Q96JB3 615 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 CDC6Q99741 560 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 CATSPERBQ9H7T0 1116 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 CCSER2Q9H7U1 834 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
SRP54-205ENST00000554803 SFMBT1Q9UHJ3 866 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 GMEB1Q9Y692 573 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 DOCK4Q8N1I0 1966 aa11.03□□□□□ -0.64
SRP54-205ENST00000554803 LOC100653049A0A140TA62 436 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 EME2A4GXA9 379 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 ZNF840PA6NDX5 716 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 ERVH48-1M5A8F1 160 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 MSI1O43347 362 aaKnown RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 GRID2O43424 1007 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 VPS4BO75351 444 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 KRT34O76011 436 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 MAP3K6O95382 1288 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TBX18O95935 607 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 IGLV3-25P01717 112 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 CKMP06732 381 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 SLC35E2BP0CK96 405 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 HLA-EP13747 358 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 GNSP15586 552 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 GABRG2P18507 467 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 NFKB1P19838 968 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 ARRB2P32121 409 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TTKP33981 857 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 CD151P48509 253 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 CRADDP78560 199 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TXNL4AP83876 142 aaKnown RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 RHDQ02161 417 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 MESP2Q0VG99 397 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 DLG1Q12959 904 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 ZBTB17Q13105 803 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 APOFQ13790 326 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TRIM25Q14258 630 aaKnown RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 PTK2BQ14289 1009 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 SLC14A2Q15849 920 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 LRRC23Q53EV4 343 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 ARL13AQ5H913 290 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 TCHHL1Q5QJ38 904 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 NAPRTQ6XQN6 538 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 DBX2Q6ZNG2 339 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 CMC1Q7Z7K0 106 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 RGL4Q8IZJ4 473 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 PELI3Q8N2H9 469 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 PCYOX1LQ8NBM8 494 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 C2CD4AQ8NCU7 369 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.02□□□□□ -0.65
SRP54-205ENST00000554803 NXPE2Q96DL1 559 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 ZNF419Q96HQ0 510 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 SLC22A12Q96S37 553 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 CDRT15Q96T59 188 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 NDNQ99608 321 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 IL12RB2Q99665 862 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TBL1YQ9BQ87 522 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms