RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZNF317Q96PQ6 595 aaPredicted RBP13.82□□□□□ -0.2
VTI1B-204ENST00000554659 CORO1BQ9BR76 489 aa13.82□□□□□ -0.2
VTI1B-204ENST00000554659 CD320Q9NPF0 282 aa13.82□□□□□ -0.2
VTI1B-204ENST00000554659 BAIAP2Q9UQB8 552 aa13.82□□□□□ -0.2
VTI1B-204ENST00000554659 MYO5BQ9ULV0 1848 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 A0A1W2PQ67 120 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 PLSCR1O15162 318 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 AIREO43918 545 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 IFNW1P05000 195 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 PTX3P26022 381 aaPredicted RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 ECT2LQ008S8 904 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 HNRNPDQ14103 355 aaKnown RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 DNAJB8Q8NHS0 232 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 ERLEC1Q96DZ1 483 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 DIRAS2Q96HU8 199 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 INTS7Q9NVH2 962 aaKnown RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 TBC1D24Q9ULP9 559 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 RIPK3Q9Y572 518 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 AQP12BA6NM10 295 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 GOT2P00505 430 aaKnown RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 AQP12AQ8IXF9 295 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 GPR152Q8TDT2 470 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 RAD51AP1Q96B01 352 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 KLRG1Q96E93 195 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 SNX27Q96L92 541 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 FRMD6Q96NE9 622 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 TCF25Q9BQ70 676 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 GPN1Q9HCN4 374 aaPredicted RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 MT-ND1P03886 318 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 RAP2AP10114 183 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 CCR3P51677 355 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 FAM46CQ5VWP2 391 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 MAB21L3Q8N8X9 362 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 AHCYL2Q96HN2 611 aaKnown RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 AIF1LQ9BQI0 150 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 INTS10Q9NVR2 710 aaKnown RBP13.81□□□□□ -0.2
VTI1B-204ENST00000554659 DHRS7Q9Y394 339 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 ATG13O75143 517 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 AP2A2O94973 939 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 CCNDBP1O95273 360 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 NR4A1P22736 598 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 SSR2P43308 183 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 INHBEP58166 350 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 GRB14Q14449 540 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 ALG11Q2TAA5 492 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 TAC4Q86UU9 113 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 FAM156AQ8NDB6 213 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 CCDC115Q96NT0 180 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 COL20A1Q9P218 1284 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 FBXW11Q9UKB1 542 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 PCDHA2Q9Y5H9 948 aa13.81□□□□□ -0.2
VTI1B-204ENST00000554659 KLF11O14901 512 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 NDUFS2O75306 463 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 TBX10O75333 385 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 HSPA7P48741 367 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 TAS2R39P59534 338 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 SCN1BQ07699 218 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 CBX2Q14781 532 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 ACBD6Q9BR61 282 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 MAGEH1Q9H213 219 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 KAT8Q9H7Z6 458 aaKnown RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 EBF2Q9HAK2 575 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 CXCR6O00574 342 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GRM6O15303 877 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 OR4F21O95013 312 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 C1RP00736 705 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 CTSEP14091 401 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GJA8P48165 433 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 RPIAP49247 311 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 SLC9B1Q4ZJI4 515 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 TMPRSS11BQ86T26 416 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 VANGL1Q8TAA9 524 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 FCGR1BQ92637 280 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 AZIN2Q96A70 460 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 FERD3LQ96RJ6 166 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 TTPALQ9BTX7 342 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 DPEP3Q9H4B8 488 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 DNAJB9Q9UBS3 223 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 GABRDO14764 452 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 PRODHO43272 600 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 VNN1O95497 513 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 ESR1P03372 595 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 AZGP1P25311 298 aaKnown RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 SCRN3Q0VDG4 424 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 RAPSNQ13702 412 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 SNAPC1Q16533 368 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 TTC29Q8NA56 475 aaPredicted RBP13.8□□□□□ -0.2
VTI1B-204ENST00000554659 OR6K2Q8NGY2 324 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF354BQ96LW1 612 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 ISM1B1AKI9 464 aa13.8□□□□□ -0.2
VTI1B-204ENST00000554659 SLC30A4O14863 429 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms