RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 CHRNA4P43681 627 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 CAPZBP47756 277 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 RPS15P62841 145 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 DYNLT1P63172 113 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 MYL5Q02045 173 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 CDK18Q07002 472 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 AP1B1Q10567 949 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 TMEM115Q12893 351 aaPredicted RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ABRQ12979 859 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ATP1A4Q13733 1029 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 LAMB3Q13751 1172 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PAFAH1B3Q15102 231 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PLCL1Q15111 1095 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 CHRNA6Q15825 494 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 UGT8Q16880 541 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 DNTTIP2Q5QJE6 756 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PLEKHS1Q5SXH7 462 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 C1orf189Q5VU69 101 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 SLC6A19Q695T7 634 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 TMEM220Q6QAJ8 160 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 SASS6Q6UVJ0 657 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ABRAXAS1Q6UWZ7 409 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 FAM151BQ6UXP7 276 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 MAMDC2Q7Z304 686 aaPredicted RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 TMC3Q7Z5M5 1100 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 C11orf96Q7Z7L8 435 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PSTKQ8IV42 348 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 APLFQ8IW19 511 aaPredicted RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ZBTB2Q8N680 514 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 RASGEF1AQ8N9B8 481 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 LMNTD1Q8N9Z9 388 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PHC3Q8NDX5 983 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 OR4E2Q8NGC2 313 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 OR1L3Q8NH93 324 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 INPP5DQ92835 1189 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ZDHHC12Q96GR4 267 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ZNF514Q96K75 400 aaPredicted RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 EIF3CQ99613 913 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PACSIN1Q9BY11 444 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 WWP1Q9H0M0 922 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 DEF6Q9H4E7 631 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 FAM96AQ9H5X1 160 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 C10orf88Q9H8K7 445 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 RMI1Q9H9A7 625 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PDE7BQ9NP56 450 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 RTN4Q9NQC3 1192 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 SAE1Q9UBE0 346 aaPredicted RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 ZNF711Q9Y462 761 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 HYOU1Q9Y4L1 999 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PCDHGA6Q9Y5G7 932 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 CSAG2Q9Y5P2 127 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 DIDO1Q9BTC0 2240 aaKnown RBP6.55□□□□□ -1.36
PCNX4-208ENST00000554534 PDZD2O15018 2839 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 TACC2O95359 2948 aa6.55□□□□□ -1.36
PCNX4-208ENST00000554534 A0A087X0T9 212 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 LRRC10BA6NIK2 292 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 CHUKO15111 745 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 HCRTR1O43613 425 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 CBX6O95503 412 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 LDLRP01130 860 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 PYGLP06737 847 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 CAPN1P07384 714 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 SNRPB2P08579 225 aaKnown RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 FAM228BP0C875 321 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 FECHP22830 423 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 SERPINB6P35237 376 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 GLRBP48167 497 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 LMAN1P49257 510 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 KPNA2P52292 529 aaKnown RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 XRCC4Q13426 336 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 OLIG2Q13516 323 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 ANO6Q4KMQ2 910 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 CRTC2Q53ET0 693 aaPredicted RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 RALGPS1Q5JS13 557 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 FNBP1LQ5T0N5 605 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 MLIPQ5VWP3 458 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 C1QL3Q5VWW1 255 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 ZNF517Q6ZMY9 492 aaPredicted RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 PRSS42Q7Z5A4 293 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 TRIM73Q86UV7 250 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 RHOT1Q8IXI2 618 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 TRAM1L1Q8N609 369 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 ANKRD20A12PQ8NF67 263 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 ZNF501Q96CX3 271 aaPredicted RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 CLIP3Q96DZ5 547 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 SLC41A2Q96JW4 573 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 TRIB3Q96RU7 358 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 SPRTNQ9H040 489 aaPredicted RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 ISCUQ9H1K1 167 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 XKR8Q9H6D3 395 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 CBX8Q9HC52 389 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 MRPL47Q9HD33 250 aaKnown RBP6.54□□□□□ -1.36
PCNX4-208ENST00000554534 MLXIPLQ9NP71 852 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 WASH6PQ9NQA3 447 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 KCND1Q9NSA2 647 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 SOHLH2Q9NX45 425 aa6.54□□□□□ -1.36
PCNX4-208ENST00000554534 AIPL1Q9NZN9 384 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms