RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PLD5Q8N7P1 536 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ENDOVQ8N8Q3 282 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KBTBD3Q8NAB2 608 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 DENND6BQ8NEG7 585 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 PRSS33Q8NF86 280 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF461Q8TAF7 563 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ACTRT2Q8TDY3 377 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SCFD2Q8WU76 684 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TGFBRAP1Q8WUH2 860 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 LPAR1Q92633 364 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 HOXB13Q92826 284 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 PTCD3Q96EY7 689 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SUCLG2Q96I99 432 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TCEANC2Q96MN5 208 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RAB3IPQ96QF0 476 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 STRBPQ96SI9 672 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SEC62Q99442 399 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RIT2Q99578 217 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 MYOCQ99972 504 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 NTMT1Q9BV86 223 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ACAT2Q9BWD1 397 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 PINK1Q9BXM7 581 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 GCOM2Q9BZD3 368 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TMEM60Q9H2L4 133 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CUEDC2Q9H467 287 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TBC1D23Q9NUY8 699 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 HYPKQ9NX55 129 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 WWOXQ9NZC7 414 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 COX16Q9P0S2 106 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 LRIT1Q9P2V4 623 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RNF7Q9UBF6 113 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SLC23A1Q9UHI7 598 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CYTH4Q9UIA0 394 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KCNE5Q9UJ90 142 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 DNAJC12Q9UKB3 198 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 SPATA2Q9UM82 520 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 ARHGAP26Q9UNA1 814 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 AP1M2Q9Y6Q5 423 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 CACNA1FO60840 1977 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 PTPRZ1P23471 2315 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-227ENST00000554491 TECTAO75443 2155 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 UTYO14607 1347 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 KDM3AQ9Y4C1 1321 aa4.41□□□□□ -1.7
ATXN3-227ENST00000554491 RFX7Q2KHR2 1363 aa4.4□□□□□ -1.7
ATXN3-227ENST00000554491 NCOR2Q9Y618 2525 aa4.4□□□□□ -1.7
ATXN3-227ENST00000554491 CHD8Q9HCK8 2581 aa4.4□□□□□ -1.7
ATXN3-227ENST00000554491 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.7
ATXN3-227ENST00000554491 GVINP1Q7Z2Y8 2422 aa4.4□□□□□ -1.7
ATXN3-227ENST00000554491 A0A0B4J269 797 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 A0A0U1RQJ8 604 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CTAGE15A4D2H0 777 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 DNAJC9-AS1A6NH13 148 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 PCP4L1A6NKN8 68 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 VSTM5A8MXK1 200 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 HSBP1L1C9JCN9 74 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ATP6V1G2-DDX39BF2Z307 99 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 AGPSO00116 658 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 IFIT3O14879 490 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 AQP9O43315 295 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 TXNL1O43396 289 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 PLA2G6O60733 806 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 NOS1APO75052 506 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 SURF6O75683 361 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CDC123O75794 336 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RBBP9O75884 186 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ZFPL1O95159 310 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 GPANK1O95872 356 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 POMCP01189 267 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 POLBP06746 335 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CTAGE8P0CG41 777 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CYP2A6P11509 494 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CPA1P15085 419 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CHN1P15882 459 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 POU3F3P20264 500 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 TCEA1P23193 301 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 GDI1P31150 447 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 HTR7P34969 479 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ETV5P41161 510 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 STAT1P42224 750 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CARD18P57730 90 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 SLC26A5P58743 744 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 STX1BP61266 288 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ERVK-21P61565 698 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 NAA20P61599 178 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CHRNDQ07001 517 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RAPSNQ13702 412 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 GALNT3Q14435 633 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 UBXN2BQ14CS0 331 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 DPYSL2Q16555 572 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 SGCAQ16586 387 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 MMEL1Q495T6 779 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 HSP90AA4PQ58FG1 418 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 WASHC2DQ5SRD0 308 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 TREML2Q5T2D2 321 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 BEND3Q5T5X7 828 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CACHD1Q5VU97 1274 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 FKBP1CQ5VVH2 108 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 DUPD1Q68J44 220 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms