RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 MARCH4Q9P2E8 410 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-211ENST00000554437 ACAD8Q9UKU7 415 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 TMEM184BQ9Y519 407 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-211ENST00000554437 TMEM8BA6NDV4 472 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TSPY2A6NKD2 308 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 ANKRD66B4E2M5 251 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TMEM189-UBE2V1I3L0A0 370 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 J3QR06 171 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 BMPR1BO00238 502 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 DVL1O14640 695 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TSPAN9O75954 239 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 GH2P01242 217 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 IGLV2-11P01706 119 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TSPY3P0CV98 308 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TSPY8P0CW00 308 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 GCH1P30793 250 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 ARCN1P48444 511 aaKnown RBP4.85□□□□□ -1.63
SCFD1-211ENST00000554437 MMP14P50281 582 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 DVL1P1P54792 670 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-211ENST00000554437 MRPS5P82675 430 aaKnown RBP4.85□□□□□ -1.63
SCFD1-211ENST00000554437 PPP2R2BQ00005 443 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TSPY1Q01534 308 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 SPOCK1Q08629 439 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 CHAF1BQ13112 559 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 UBE2V1Q13404 147 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 WTAPQ15007 396 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 PSMD6Q15008 389 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 ACCSLQ4AC99 568 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 PLEKHS1Q5SXH7 462 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 ZDHHC20Q5W0Z9 365 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 ENOSF1Q7L5Y1 443 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 CEP97Q8IW35 865 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 RSPH1Q8WYR4 309 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 CCDC34Q96HJ3 373 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 ZNF583Q96ND8 569 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 DDOQ99489 341 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 GFI1Q99684 422 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 CCDC68Q9H2F9 335 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 HRH4Q9H3N8 390 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TRMT1Q9NXH9 659 aaKnown RBP4.85□□□□□ -1.63
SCFD1-211ENST00000554437 SUCLA2Q9P2R7 463 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-211ENST00000554437 TSPYL4Q9UJ04 414 aa4.85□□□□□ -1.63
SCFD1-211ENST00000554437 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.85□□□□□ -1.63
SCFD1-211ENST00000554437 A0A1W2PQ09 198 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 LRRC72A6NJI9 287 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 LMX1BO60663 402 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 MITFO75030 526 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 CTNNA1P35221 906 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 AHRP35869 848 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 CUL4AQ13619 759 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 ACVR2BQ13705 512 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 SIRPB2Q5JXA9 342 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 ZNF852Q6ZMS4 543 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 Q75L30 129 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 CUZD1Q86UP6 607 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 GBGT1Q8N5D6 347 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 C1orf52Q8N6N3 182 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 LMNTD1Q8N9Z9 388 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 NSUN4Q96CB9 384 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 CALML4Q96GE6 196 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 OXNAD1Q96HP4 312 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 CDHR1Q96JP9 859 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 ZCCHC17Q9NP64 241 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 MRGBPQ9NV56 204 aa4.84□□□□□ -1.63
SCFD1-211ENST00000554437 RCC2Q9P258 522 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 NFKBIL1Q9UBC1 381 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 EXO1Q9UQ84 846 aaKnown RBP4.84□□□□□ -1.63
SCFD1-211ENST00000554437 hCG_1807616A0A1W2PRN6 198 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 CTDSP2O14595 271 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 AHCYL1O43865 530 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 CSH1P0DML2 217 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 CSH2P0DML3 217 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 MMP9P14780 707 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 ZNF23P17027 643 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 GM2AP17900 193 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 SLC15A1P46059 708 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 MLLT10P55197 1068 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 SNX16P57768 344 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 KRT83P78385 493 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 RBBP5Q15291 538 aaKnown RBP4.83□□□□□ -1.64
SCFD1-211ENST00000554437 DLG2Q15700 870 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 STPG1Q5TH74 334 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 ZNF534Q76KX8 674 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 MCEMP1Q8IX19 187 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 TAGAPQ8N103 731 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 NDUFAF2Q8N183 169 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 RDM1Q8NG50 284 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 DNASE2BQ8WZ79 361 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 DACH2Q96NX9 599 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 NODALQ96S42 347 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 HGH1Q9BTY7 390 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 TRPC7Q9HCX4 862 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 TAAR2Q9P1P5 351 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 SEC63Q9UGP8 760 aaKnown RBP4.83□□□□□ -1.64
SCFD1-211ENST00000554437 FAF1Q9UNN5 650 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-211ENST00000554437 PCDHGA5Q9Y5G8 931 aa4.83□□□□□ -1.64
SCFD1-211ENST00000554437 A0A1W2PR77 199 aa4.82□□□□□ -1.64
SCFD1-211ENST00000554437 CTAGE9A4FU28 777 aa4.82□□□□□ -1.64
SCFD1-211ENST00000554437 C15orf62A8K5M9 175 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms