RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 PCDHGA3Q9Y5H0 932 aa16.75■□□□□ 0.27
PPP4R3A-202ENST00000554390 EIF3FO00303 357 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 RFPL2O75678 378 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SOAT2O75908 522 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 ANXA9O76027 345 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 MZF1P28698 734 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 ADRA1AP35348 466 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 PIGAP37287 484 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 PM20D1Q6GTS8 502 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 LAIR2Q6ISS4 152 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 ZNF549Q6P9A3 640 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 PRR23BQ6ZRT6 265 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 MIB1Q86YT6 1006 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 GALNT13Q8IUC8 556 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 RIMKLAQ8IXN7 391 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 ELMOD1Q8N336 334 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 OR10T2Q8NGX3 314 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLC9A7Q96T83 725 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLC52A3Q9NQ40 469 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 INTS7Q9NVH2 962 aaKnown RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 UXTQ9UBK9 157 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 BRCA1P38398 1863 aaKnown RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 MTSS1O43312 755 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CAPN15O75808 1086 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SEC24AO95486 1093 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 FSHRP23945 695 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 ALDH7A1P49419 539 aaKnown RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 COPZ1P61923 177 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 BLOC1S3Q6QNY0 202 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 PAGE2Q7Z2X7 111 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 RBM23Q86U06 439 aaKnown RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLC22A9Q8IVM8 553 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 OR10Q1Q8NGQ4 319 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 HMCESQ96FZ2 354 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 AURKBQ96GD4 344 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SP140LQ9H930 580 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 OSER1Q9NX31 292 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 TESMINQ9Y4I5 508 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 TTC34A8MYJ7 566 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CXCL11O14625 94 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 MATN3O15232 486 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 KCNK2O95069 426 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CHRNA1P02708 482 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 RBP1P09455 135 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 KCNE1P15382 129 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CDKN1CP49918 316 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 PPP5CP53041 499 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 MFSD10Q14728 455 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CRY1Q16526 586 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 CCL14Q16627 93 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SPATS1Q496A3 300 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 HS3ST5Q8IZT8 346 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 VAT1Q99536 393 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 AMBRA1Q9C0C7 1298 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 SDR39U1Q9NRG7 319 aaPredicted RBP16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 GALPQ9UBC7 116 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 ASB1Q9Y576 335 aa16.74■□□□□ 0.27
PPP4R3A-202ENST00000554390 TSC2P49815 1807 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 TNFRSF10AO00220 468 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 NOBOXO60393 691 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 DLGAP3O95886 979 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 SEPHS1P49903 392 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 EMX1Q04741 257 aaPredicted RBP16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 FAM209AQ5JX71 171 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 CILP2Q8IUL8 1156 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 PHYKPLQ8IUZ5 450 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 RHOXF1Q8NHV9 184 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 FAR1Q8WVX9 515 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 CLIP3Q96DZ5 547 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 TRMOQ9BU70 441 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 HS3ST4Q9Y661 456 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 GOLGA8CPA6NN73 597 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 SLC1A7O00341 560 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 DYRK3O43781 588 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 DNAJB5O75953 348 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 MATN4O95460 622 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 NTRK1P04629 796 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 GSNP06396 782 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 PAMP19021 973 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 GEMP55040 296 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 OR4D2P58180 307 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 UFM1P61960 85 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 GLYATQ6IB77 296 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 GPR142Q7Z601 462 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 LYSMD2Q8IV50 215 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 ZNF555Q8NEP9 628 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 DYNC2LI1Q8TCX1 351 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 NSMCE2Q96MF7 247 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 MBOAT4Q96T53 435 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 TINF2Q9BSI4 451 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 BTBD2Q9BX70 525 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 NECTIN3Q9NQS3 549 aa16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 POLR3BQ9NW08 1133 aaPredicted RBP16.73■□□□□ 0.27
PPP4R3A-202ENST00000554390 A0A1W2PP18 115 aa16.72■□□□□ 0.27
PPP4R3A-202ENST00000554390 ASPDHA6ND91 283 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms