RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SIDT2Q8NBJ9 832 aaKnown RBP10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 MGARPQ8TDB4 240 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 KCTD4Q8WVF5 259 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 ASZ1Q8WWH4 475 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 ELMO1Q92556 727 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 FAM136AQ96C01 138 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 BIRC7Q96CA5 298 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 NXNL1Q96CM4 212 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 MYOCQ99972 504 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 FZD3Q9NPG1 666 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 ATXN10Q9UBB4 475 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 MOSPD1Q9UJG1 213 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 TMEM98Q9Y2Y6 226 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 OR1A2Q9Y585 309 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 DNMT3AQ9Y6K1 912 aaPredicted RBP10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 PRSS21Q9Y6M0 314 aa10.31□□□□□ -0.76
TMEM55B-205ENST00000554028 C17orf113A0A1B0GUU1 675 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 A0A1W2PPC4 97 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 EIF3FO00303 357 aaPredicted RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 KMOO15229 486 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 RAD51BO15315 384 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 KCNJ13O60928 360 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 IGHV4-34P06331 123 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ZNF37AP17032 561 aaPredicted RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ZNF8P17098 575 aaPredicted RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 TAC1P20366 129 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 CD27P26842 260 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 IGFALSP35858 605 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 MAPK9P45984 424 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 RABIFP47224 123 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 PRLHRP49683 370 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 CLCN7P51798 805 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 KIAA1024LP59773 190 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 IRF9Q00978 393 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 CSTF1Q05048 431 aaKnown RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 HSPA14Q0VDF9 509 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ASPHQ12797 758 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ZNF460Q14592 562 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 LVRNQ6Q4G3 990 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 LPCAT2Q7L5N7 544 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 CLEC14AQ86T13 490 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 PIM3Q86V86 326 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 LONP2Q86WA8 852 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 DCP2Q8IU60 420 aaKnown RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 C1orf210Q8IVY1 113 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 TRIM42Q8IWZ5 723 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 PELI3Q8N2H9 469 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 FAM160A2Q8N612 972 aaPredicted RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ARMC2Q8NEN0 867 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 PPP1R14CQ8TAE6 165 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 STAG3L4Q8TBR4 150 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 MDM1Q8TC05 714 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 RDH11Q8TC12 318 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 CD200R1Q8TD46 325 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 SKA2Q8WVK7 121 aaPredicted RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 FUBP1Q96AE4 644 aaKnown RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 TMEM159Q96B96 161 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 SKA1Q96BD8 255 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 LINGO1Q96FE5 620 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 PDLIM5Q96HC4 596 aaKnown RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 UBXN10Q96LJ8 280 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 FAM111AQ96PZ2 611 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 MRPL57Q9BQC6 102 aaKnown RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 DERL2Q9GZP9 239 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 MRPL46Q9H2W6 279 aaKnown RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ZNHIT2Q9UHR6 403 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 INVSQ9Y283 1065 aa10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.3□□□□□ -0.76
TMEM55B-205ENST00000554028 MYLKQ15746 1914 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 SYCE1LA8MT33 242 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 LIN7AO14910 233 aaPredicted RBP10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 GRID2O43424 1007 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 NUAK1O60285 661 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 PLIN3O60664 434 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 POP7O75817 140 aaKnown RBP10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 CPA3P15088 417 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 TFEBP19484 476 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 AOAHP28039 575 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 PBLDP30039 288 aaPredicted RBP10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 CCR7P32248 378 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 MDH1P40925 334 aaKnown RBP10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 GLRBP48167 497 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 FNTBP49356 437 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 CSRP3P50461 194 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 CLDN2P57739 230 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 PFN3P60673 137 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 IRX4P78413 519 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 BOP1Q14137 746 aaKnown RBP10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 NFATC4Q14934 902 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 KHDC1Q4VXA5 237 aaKnown RBP10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 WDR45BQ5MNZ6 344 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 C16orf46Q6P387 395 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 CRTC3Q6UUV7 619 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 ENPP7Q6UWV6 458 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 Q6ZSR6 202 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 BMP8AQ7Z5Y6 402 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 WDR5BQ86VZ2 330 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 AMZ2Q86W34 360 aa10.29□□□□□ -0.76
TMEM55B-205ENST00000554028 GALNT13Q8IUC8 556 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms