RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DOK6Q6PKX4 331 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 Q6ZSR6 202 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 DET1Q7L5Y6 550 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 OXR1Q8N573 874 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 NKAPQ8N5F7 415 aaKnown RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 CLDN19Q8N6F1 224 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 OR13H1Q8NG92 308 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 ASZ1Q8WWH4 475 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 SCARF2Q96GP6 870 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-210ENST00000553950 CCM2Q9BSQ5 444 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 MIR1-1HGQ9H1L0 117 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 TM9SF3Q9HD45 589 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 LATS2Q9NRM7 1088 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 ACOT9Q9Y305 439 aa14.29□□□□□ -0.12
SHMT2-210ENST00000553950 MUC3AQ02505 3323 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 A0A096LPK6 155 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 A0A1B0GTW7 788 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 HMX2A2RU54 273 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 OR2AG2A6NM03 316 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 H0Y8X5 98 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 H3BM21 787 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 BCAT2O15382 392 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-210ENST00000553950 LILRB5O75023 590 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 RASGRP1O95267 797 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 TRIM16O95361 564 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 ZNF8P17098 575 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-210ENST00000553950 SAT1P21673 171 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 DGKAP23743 735 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 CA5AP35218 305 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 C21orf59P57076 290 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 RPA4Q13156 261 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 INSCQ1MX18 579 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 FAM83EQ2M2I3 478 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 TMEM220Q6QAJ8 160 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 ZBTB2Q8N680 514 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 CD200R1Q8TD46 325 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 ELMO1Q92556 727 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 INPP5DQ92835 1189 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 GLMNQ92990 594 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 TMEM159Q96B96 161 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 APOPT1Q96IL0 206 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 OR2M4Q96R27 311 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 GPR21Q99679 349 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 LGR4Q9BXB1 951 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 IRF2BPLQ9H1B7 796 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 EBF2Q9HAK2 575 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 C11orf16Q9NQ32 467 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 PCMTD2Q9NV79 361 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 MID2Q9UJV3 735 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 RAB23Q9ULC3 237 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 DHRS7Q9Y394 339 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 DGKBQ9Y6T7 804 aa14.28□□□□□ -0.12
SHMT2-210ENST00000553950 BPTFQ12830 3046 aa14.27□□□□□ -0.12
SHMT2-210ENST00000553950 SPTY2D1-AS1A0A0U1RR47 76 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 A0A1W2PR77 199 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 MGAT4DA6NG13 374 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 COPEO14579 308 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 VILLO15195 856 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 DNAJC6O75061 913 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 RFPL1O75677 317 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CEACAM5P06731 702 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 KRT4P19013 534 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CCT5P48643 541 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CLCN7P51798 805 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CTSCP53634 463 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CDKN2DP55273 166 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 IL2P60568 153 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 ATP6V0D1P61421 351 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 DMPKQ09013 629 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 BOP1Q14137 746 aaKnown RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 SIM2Q14190 667 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 AGAP9Q5VTM2 703 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 PEAR1Q5VY43 1037 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CRTC3Q6UUV7 619 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 ENPP7Q6UWV6 458 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 MICALCLQ6ZW33 695 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 NEK10Q6ZWH5 1172 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 MTERF4Q7Z6M4 381 aaKnown RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CMC1Q7Z7K0 106 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 AMZ2Q86W34 360 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 MYO1HQ8N1T3 1032 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 ARFGAP2Q8N6H7 521 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 OR2L2Q8NH16 312 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CEP76Q8TAP6 659 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 SGF29Q96ES7 293 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 LOXL4Q96JB6 756 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 OLFM1Q99784 485 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 VPS11Q9H270 941 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CAB39LQ9H9S4 337 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 FGF22Q9HCT0 170 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 SARS2Q9NP81 518 aaKnown RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 TRNAU1APQ9NX07 287 aaKnown RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 DCDC2Q9UHG0 476 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 NOVA2Q9UNW9 492 aaKnown RBP14.27□□□□□ -0.13
SHMT2-210ENST00000553950 PRSS21Q9Y6M0 314 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 CACNA1EQ15878 2313 aa14.27□□□□□ -0.13
SHMT2-210ENST00000553950 PI4KAP42356 2102 aa14.26□□□□□ -0.13
SHMT2-210ENST00000553950 PABPN1LA6NDY0 278 aaKnown RBP14.26□□□□□ -0.13
SHMT2-210ENST00000553950 TMEM202A6NGA9 273 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms