RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 NSFP46459 744 aaKnown RBP7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SCNN1BP51168 640 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 UBE2IP63279 158 aaKnown RBP7.19□□□□□ -1.26
ATXN3-219ENST00000553488 IL10RBQ08334 325 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SLC10A7Q0GE19 358 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 NFATC2Q13469 925 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SEMA5AQ13591 1074 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 LAMB3Q13751 1172 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 ERV3-1Q14264 604 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CLEC16AQ2KHT3 1053 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 NADK2Q4G0N4 442 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 PRR30Q53SZ7 412 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-219ENST00000553488 WIPI1Q5MNZ9 446 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-219ENST00000553488 PAPD7Q5XG87 772 aaKnown RBP7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CPZQ66K79 652 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 DENND2CQ68D51 928 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SCYL2Q6P3W7 929 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 TRIM72Q6ZMU5 477 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 HDXQ7Z353 690 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 GALNT13Q8IUC8 556 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 NCSTNQ92542 709 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 MCEEQ96PE7 176 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SMIM14Q96QK8 99 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 PEBP4Q96S96 227 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 AGAP2Q99490 1192 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 MGME1Q9BQP7 344 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CNPY3Q9BT09 278 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 TBC1D10AQ9BXI6 508 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 ULBP3Q9BZM4 244 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 ABCG8Q9H221 673 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 SP110Q9HB58 689 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 MLXIPLQ9NP71 852 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 OGFRQ9NZT2 677 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 ADAM22Q9P0K1 906 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 TBC1D29Q9UFV1 150 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 KLHL3Q9UH77 587 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CD84Q9UIB8 345 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 PPIL1Q9Y3C6 166 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CNTRLQ7Z7A1 2325 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CCDC168Q8NDH2 2452 aa7.19□□□□□ -1.26
ATXN3-219ENST00000553488 CCDC88CQ9P219 2028 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 NUP210LQ5VU65 1888 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 GOLGA6CA6NDK9 693 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 GOLGA6BA6NDN3 693 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 WIPF3A6NGB9 483 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 EEF2KO00418 725 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 CREG1O75629 220 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 KIAA0754O94854 1291 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 PGLSO95336 258 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 RECKO95980 971 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 LDLRP01130 860 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 CALB1P05937 261 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 GOLGA6DP0CG33 693 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 CYP2A6P11509 494 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 ERCC2P18074 760 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 SOX5P35711 763 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 GPR1P46091 355 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 KLK7P49862 253 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 DNASE1L3Q13609 305 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 DPYSQ14117 519 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 HSP90AA4PQ58FG1 418 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 LRRC66Q68CR7 880 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 DNAJC24Q6P3W2 148 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 IYDQ6PHW0 289 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 C6orf15Q6UXA7 325 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 RFX8Q6ZV50 586 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 MARK2Q7KZI7 788 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 PLD6Q8N2A8 252 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 ARFGAP1Q8N6T3 406 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 Q8NA96 180 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 PIH1D2Q8WWB5 315 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 SCAMP4Q969E2 229 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 AP2M1Q96CW1 435 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 SCRN2Q96FV2 425 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 C9orf72Q96LT7 481 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF599Q96NL3 588 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 NUDCD1Q96RS6 583 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 RUFY1Q96T51 708 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 HERPUD2Q9BSE4 406 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 SNRNP25Q9BV90 132 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 BRD8Q9H0E9 1235 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 VPS16Q9H269 839 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF768Q9H5H4 540 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 NOD2Q9HC29 1040 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 SSU72Q9NP77 194 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 GOLGA6AQ9NYA3 693 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 DONSONQ9NYP3 566 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 VPS18Q9P253 973 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 PHTF1Q9UMS5 762 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 PCDHGA9Q9Y5G4 932 aaKnown RBP7.18□□□□□ -1.26
ATXN3-219ENST00000553488 ANKRD12Q6UB98 2062 aa7.18□□□□□ -1.26
ATXN3-219ENST00000553488 KIR2DS5A0A0G2JLQ3 304 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 A0A0G2JNG1 304 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 TCP11X1B4DZS4 312 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 EIF3CLB5ME19 914 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 KIR2DS3K7RE56 304 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 DFFAO00273 331 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms