RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TOX3O15405 576 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 TMEM63AO94886 807 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 UBXN7O94888 489 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 GNA14O95837 355 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CPP00450 1065 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ATP1A1P05023 1023 aaKnown RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CYP2A6P11509 494 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 F3P13726 295 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SLC2A4P14672 509 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 FOSL1P15407 271 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 LPOP22079 712 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 LHCGRP22888 699 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ITGA3P26006 1051 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SDC4P31431 198 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CDH5P33151 784 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PREPP48147 710 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 GLRBP48167 497 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PAPOLAP51003 745 aaKnown RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 HDAC4P56524 1084 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 AP1S1P61966 158 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 UBE2IP63279 158 aaKnown RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 KRT85P78386 507 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 DPTQ07507 201 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PAK1Q13153 545 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 TUBB3Q13509 450 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 LAMB3Q13751 1172 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 KCNAB1Q14722 419 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 KIR2DS5Q14953 304 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CPSF6Q16630 551 aaKnown RBP eCLIP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 EXOC3L4Q17RC7 722 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 C11orf91Q3C1V1 193 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 VWA5B1Q5TIE3 1220 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 NAA35Q5VZE5 725 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 IRGCQ6NXR0 463 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ADAMTSL4Q6UY14 1074 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ZNF517Q6ZMY9 492 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 GBP6Q6ZN66 633 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ZNF662Q6ZS27 426 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 FAM92BQ6ZTR7 304 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 TMEM26Q6ZUK4 368 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ARCQ7LC44 396 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PRSS42Q7Z5A4 293 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 TECPR1Q7Z6L1 1165 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 NOP9Q86U38 636 aaKnown RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 TSPAN33Q86UF1 283 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CREBRFQ8IUR6 639 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ANKMY2Q8IV38 441 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 UMODL1-AS1Q8N2C9 162 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CBARPQ8N350 705 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 LZTR1Q8N653 840 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 MSANTD4Q8NCY6 345 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ST6GALNAC3Q8NDV1 305 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 JOSD2Q8TAC2 188 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ADAMTS17Q8TE56 1095 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 FAM172AQ8WUF8 416 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 UBE2Q2Q8WVN8 375 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CPA5Q8WXQ8 436 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 INPP5DQ92835 1189 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 NTAN1Q96AB6 310 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 AP2M1Q96CW1 435 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 AGAP2Q99490 1192 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SMAD5Q99717 465 aaKnown RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CINPQ9BW66 212 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ILKAPQ9H0C8 392 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ABCG8Q9H221 673 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CHST8Q9H2A9 424 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CATSPERBQ9H7T0 1116 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SP110Q9HB58 689 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PDE7BQ9NP56 450 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 COPG2Q9UBF2 871 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 DNAJC12Q9UKB3 198 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 RARRES3Q9UL19 164 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 SNX7Q9UNH6 387 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 CTNND2Q9UQB3 1225 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 B3GNT3Q9Y2A9 372 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 NCOA6Q14686 2063 aaPredicted RBP5.28□□□□□ -1.56
HOXB3-213ENST00000552000 PCSK5Q92824 1860 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 ZANQ9Y493 2812 aa5.28□□□□□ -1.56
HOXB3-213ENST00000552000 BICDL2A1A5D9 508 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 C2CD4BA6NLJ0 364 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 OR5K4A6NMS3 321 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 DBX1A6NMT0 343 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 PSMD11O00231 422 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 HTRA2O43464 458 aaPredicted RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 DNAJC6O75061 913 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 LSM8O95777 96 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 VIPP01282 170 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 HSP90AA1P07900 732 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 FOLR1P15328 257 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 CYP11B1P15538 503 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 CTPS1P17812 591 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 NELFEP18615 380 aaKnown RBP5.27□□□□□ -1.57
HOXB3-213ENST00000552000 PON1P27169 355 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 MAPK1P28482 360 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 PTPN9P43378 593 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 BPIFB4P59827 614 aa5.27□□□□□ -1.57
HOXB3-213ENST00000552000 TPI1P60174 286 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms