RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TAPBPO15533 448 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 FFAR2O15552 330 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 TBX10O75333 385 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 TULP3O75386 442 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GPC4O75487 556 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ESRRBO95718 433 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 MLYCDO95822 493 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ADH1CP00326 375 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 S100BP04271 92 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ENO3P13929 434 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GPX3P22352 226 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GCKP35557 465 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 NNMTP40261 264 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DPP6P42658 865 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 NRIP1P48552 1158 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 PKNOX1P55347 436 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DCDC1P59894 354 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 POLR2LP62875 67 aaKnown RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 KCNC3Q14003 757 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ARHGEF7Q14155 803 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GRB7Q14451 532 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GBX1Q14549 363 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 RBBP7Q16576 425 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 PHKG1Q16816 387 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 AGKQ53H12 422 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ARSIQ5FYB1 569 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ZDHHC20Q5W0Z9 365 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 REP15Q6BDI9 236 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 BNC2Q6ZN30 1099 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GPRIN3Q6ZVF9 776 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DPPA4Q7L190 304 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 EFL1Q7Z2Z2 1120 aaKnown RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 GOLGA7Q7Z5G4 137 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 HPS6Q86YV9 775 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DDIASQ8IXT1 998 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 FBXW8Q8N3Y1 598 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ZNF366Q8N895 744 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 SNX31Q8N9S9 440 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DTX3LQ8TDB6 740 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 BPIFB1Q8TDL5 484 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 UBTD2Q8WUN7 234 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 NRG4Q8WWG1 115 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DLG3Q92796 817 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ASB16Q96NS5 453 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 COPS8Q99627 209 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 TMEM79Q9BSE2 394 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 TACO1Q9BSH4 297 aaKnown RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 SFXN1Q9H9B4 322 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 CERS4Q9HA82 394 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 PCDH12Q9NPG4 1184 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 SPATS2LQ9NUQ6 558 aaKnown RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 MRGBPQ9NV56 204 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 KCTD5Q9NXV2 234 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 KLHL42Q9P2K6 505 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 STX18Q9P2W9 335 aaKnown RBP11.34□□□□□ -0.59
RAB5C-208ENST00000551338 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 IL36AQ9UHA7 158 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 CD84Q9UIB8 345 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 PACSIN3Q9UKS6 424 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 POMPQ9Y244 141 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 ST14Q9Y5Y6 855 aa11.34□□□□□ -0.59
RAB5C-208ENST00000551338 TICRRQ7Z2Z1 1910 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PRRT4C9JH25 899 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 OR7A17O14581 309 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 FKBP6O75344 327 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 NFATC1O95644 943 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 LINC00032P0C843 101 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 CBSLP0DN79 551 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 UROSP10746 265 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 LBPP18428 481 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 CBSP35520 551 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PBX2P40425 430 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 SLC6A11P48066 632 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PTDSS1P48651 473 aaKnown RBP11.33□□□□□ -0.6
RAB5C-208ENST00000551338 HTR6P50406 440 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 SLC34A1Q06495 639 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 TRAF3Q13114 568 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 SHHQ15465 462 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 CRY1Q16526 586 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 TTLL9Q3SXZ7 439 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 ZNF805Q5CZA5 627 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PIGGQ5H8A4 983 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 OGFOD2Q6N063 350 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
RAB5C-208ENST00000551338 FUNDC1Q8IVP5 155 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 OR52B6Q8NGF0 335 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 GDPD5Q8WTR4 605 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 NXPE3Q969Y0 559 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 CCDC124Q96CT7 223 aaKnown RBP11.33□□□□□ -0.6
RAB5C-208ENST00000551338 LRIG1Q96JA1 1093 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 ZFYVE19Q96K21 471 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 LMAN2LQ9H0V9 348 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 ABCG8Q9H221 673 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 WDR41Q9HAD4 459 aa11.33□□□□□ -0.6
RAB5C-208ENST00000551338 EFCAB1Q9HAE3 211 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms