RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 SRRDQ9UH36 339 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 NR2E1Q9Y466 385 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 NUBP2Q9Y5Y2 271 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ZCCHC11Q5TAX3 1644 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SMCO3A2RU48 225 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 FAM149AA5PLN7 773 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 CSN2P05814 226 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 DLDP09622 509 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 NCF1P14598 390 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SNAPC2Q13487 334 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 BMT2Q1RMZ1 405 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 C6orf141Q5SZD1 244 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MILR1Q7Z6M3 343 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MARK4Q96L34 752 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ZYG11BQ9C0D3 744 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ERVK-5Q9HDB9 667 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 NDRG3Q9UGV2 375 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 TRPV2Q9Y5S1 764 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 HGFP14210 728 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MMP8P22894 467 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 EXOC3L2Q2M3D2 409 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 IRAK1BP1Q5VVH5 260 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 OVOS1Q6IE37 1185 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 TMEM179Q6ZVK1 233 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF557Q8N988 423 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC22A17Q8WUG5 538 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 RBPMSQ93062 196 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 COQ10AQ96MF6 247 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 OPA3Q9H6K4 179 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 OAZ3Q9UMX2 235 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 TET3O43151 1660 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SLIT1O75093 1534 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MYO3AQ8NEV4 1616 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 DCLK1O15075 740 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MSI1O43347 362 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ODC1P11926 461 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MZF1P28698 734 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC5A2P31639 672 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 CDH11P55287 796 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MTMR1Q13613 665 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 OXA1LQ15070 435 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ZC3HC1Q86WB0 502 aaKnown RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 CARM1Q86X55 608 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 PHACTR4Q8IZ21 702 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF548Q8NEK5 533 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 NGLY1Q96IV0 654 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 FEM1AQ9BSK4 669 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 MECRQ9BV79 373 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 RASSF1Q9NS23 344 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 EVLQ9UI08 416 aaPredicted RBP8.7□□□□□ -1.02
PPFIA2-220ENST00000550584 USP17L5A8MUK1 530 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 UBBP0CG47 229 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 UBCP0CG48 685 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 HOXD11P31277 338 aaPredicted RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 MLLT6P55198 1093 aaPredicted RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 RPS27AP62979 156 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 UBA52P62987 128 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 TARDBPQ13148 414 aaKnown RBP eCLIP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 TRIM28Q13263 835 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 C3orf67Q6ZVT6 689 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 MOB2Q70IA6 237 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ATCAYQ86WG3 371 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 CCDC24Q8N4L8 307 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 RHOXF1Q8NHV9 184 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 NPLOC4Q8TAT6 608 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 RHOJQ9H4E5 214 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 PIF1Q9H611 641 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF408Q9H9D4 720 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 DCP1AQ9NPI6 582 aaPredicted RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 C1orf109Q9NX04 203 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ZNF175Q9Y473 711 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ASB14A6NK59 587 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 BET1O15155 118 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 SEC22BO75396 215 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 UGT2B17O75795 530 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 SNX4O95219 450 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ATE1O95260 518 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 NAT2P11245 290 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC26A2P50443 739 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 CHRNEQ04844 493 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 SLC13A2Q13183 592 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 INTS6LQ5JSJ4 861 aaKnown RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 GRHL2Q6ISB3 625 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 ADAMTSL2Q86TH1 951 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 CEP97Q8IW35 865 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 STK40Q8N2I9 435 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 RPRD1AQ96P16 312 aaPredicted RBP8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 TBL1YQ9BQ87 522 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 CEP41Q9BYV8 373 aa8.69□□□□□ -1.02
PPFIA2-220ENST00000550584 MROH8Q9H579 483 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms