RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	SELENOS	Q9BQE4	189 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCM2	Q9BSQ5	444 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	LGR4	Q9BXB1	951 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC13A1	Q9BZW2	595 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	NKIRAS1	Q9NYS0	192 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	EIF2B4	Q9UI10	523 aa	Known RBP	11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	MOSPD1	Q9UJG1	213 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	MID2	Q9UJV3	735 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	DHRS7	Q9Y394	339 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	PRSS21	Q9Y6M0	314 aa		11.45	□□□□□ -0.58
CNOT2-223	ENST00000550160	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	IQCF5	A8MTL0	148 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160		H0Y8X5	98 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	EIF3F	O00303	357 aa	Predicted RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	TNFRSF10C	O14798	259 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CHUK	O15111	745 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	KMO	O15229	486 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	TM9SF1	O15321	606 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	GRID2	O43424	1007 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	DNAJC6	O75061	913 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZWINT	O95229	277 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	LTA4H	P09960	611 aa	Known RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CBSL	P0DN79	551 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	ENO3	P13929	434 aa	Predicted RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZNF8	P17098	575 aa	Predicted RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	BCKDHB	P21953	392 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	DGKA	P23743	735 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	OAS2	P29728	719 aa	Known RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CBS	P35520	551 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CLCN7	P51798	805 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	PPP2R2A	P63151	447 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLOD1	Q02809	727 aa	Predicted RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC18A2	Q05940	514 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	BOP1	Q14137	746 aa	Known RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLEKHS1	Q5SXH7	462 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CRTC3	Q6UUV7	619 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160		Q6ZSR6	202 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CEP68	Q76N32	757 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	PIM3	Q86V86	326 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	GALNT13	Q8IUC8	556 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	TMEFF1	Q8IYR6	380 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	KRT222	Q8N1A0	295 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	MYO1H	Q8N1T3	1032 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	DEFB119	Q8N690	84 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	BANP	Q8N9N5	519 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	MFSD2A	Q8NA29	543 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	SIDT2	Q8NBJ9	832 aa	Known RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	FAM76A	Q8TAV0	307 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	ASZ1	Q8WWH4	475 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	TMEM159	Q96B96	161 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	FAM136A	Q96C01	138 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCDC97	Q96F63	343 aa	Predicted RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	KLHDC7B	Q96G42	594 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	BMF	Q96LC9	184 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	LINC00615	Q96LM1	132 aa	Predicted RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	MIR1-1HG	Q9H1L0	117 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	CNOT10	Q9H9A5	744 aa	Known RBP	11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	NMRAL1	Q9HBL8	299 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	LATS2	Q9NRM7	1088 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	KL	Q9UEF7	1012 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC17A4	Q9Y2C5	497 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	TMEM98	Q9Y2Y6	226 aa		11.44	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLXND1	Q9Y4D7	1925 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	C17orf113	A0A1B0GUU1	675 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	TMEM120B	A0PK00	339 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCDC189	A1A4V9	331 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PRSS38	A1L453	326 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	FOXO6	A8MYZ6	492 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	LIN7A	O14910	233 aa	Predicted RBP	11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PRPF4	O43172	522 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-7	■■■■■ 27.9
CNOT2-223	ENST00000550160	KCNJ13	O60928	360 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	SPAG7	O75391	227 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	KLHL2	O95198	593 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCDC166	P0CW27	439 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	THEGL	P0DJG4	465 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	AOAH	P28039	575 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CD38	P28907	300 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PBLD	P30039	288 aa	Predicted RBP	11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CRHR1	P34998	444 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	DPP6	P42658	865 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CSRP3	P50461	194 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CTSC	P53634	463 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	ATP6V0D1	P61421	351 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CSHL1	Q14406	222 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZNF460	Q14592	562 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	TEAD4	Q15561	434 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PPM1J	Q5JR12	505 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	LYSMD4	Q5XG99	296 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PMS2CL	Q68D20	193 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PAQR3	Q6TCH7	311 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	ENPP7	Q6UWV6	458 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	AMZ2	Q86W34	360 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	OR13H1	Q8NG92	308 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	HM13	Q8TCT9	377 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	KCTD4	Q8WVF5	259 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	DNASE2B	Q8WZ79	361 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	GLMN	Q92990	594 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms