RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 DTX3LQ8TDB6 740 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 OLFM3Q96PB7 478 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 CD180Q99467 661 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 GLOD4Q9HC38 313 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 NENFQ9UMX5 172 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 WDR37Q9Y2I8 494 aa13.3□□□□□ -0.28
TROAP-211ENST00000549891 IGHV5-51A0A0C4DH38 117 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 UBA6A0AVT1 1052 aaPredicted RBP13.29□□□□□ -0.28
TROAP-211ENST00000549891 BLACEA4D250 179 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 TLCD2A6NGC4 264 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 CPNE3O75131 537 aaKnown RBP13.29□□□□□ -0.28
TROAP-211ENST00000549891 PMPCBO75439 489 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 TIAF1O95411 115 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 GYPCP04921 128 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 FOLR1P15328 257 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 SPAM1P38567 509 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 ARHGAP25P42331 645 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 PGDP52209 483 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 HSD11B2P80365 405 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 C4orf17Q53FE4 359 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 DNTTIP2Q5QJE6 756 aaKnown RBP13.29□□□□□ -0.28
TROAP-211ENST00000549891 CAVIN1Q6NZI2 390 aaKnown RBP13.29□□□□□ -0.28
TROAP-211ENST00000549891 RFX6Q8HWS3 928 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 GALNT11Q8NCW6 608 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 OR8K5Q8NH50 307 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 ZNF514Q96K75 400 aaPredicted RBP13.29□□□□□ -0.28
TROAP-211ENST00000549891 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 BPIFA1Q9NP55 256 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 FGF21Q9NSA1 209 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 HACD3Q9P035 362 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 SPO11Q9Y5K1 396 aa13.29□□□□□ -0.28
TROAP-211ENST00000549891 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.29□□□□□ -0.28
TROAP-211ENST00000549891 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
TROAP-211ENST00000549891 ICE1Q9Y2F5 2266 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 C3orf70A6NLC5 250 aaPredicted RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 AURKAO14965 403 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 POP7O75817 140 aaKnown RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 DNAJB5O75953 348 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 AGFG2O95081 481 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 EPOP01588 193 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TMEM253P0C7T8 217 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 EBLN1P0CF75 366 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 HNRNPH3P31942 346 aaKnown RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 NR2C2P49116 596 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TUBB4BP68371 445 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 XRCC4Q13426 336 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 KCNAB1Q14722 419 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 RPE65Q16518 533 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 PPP2R5EQ16537 467 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TMTC4Q5T4D3 741 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 FHL5Q5TD97 284 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 LRRC38Q5VT99 294 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 ARMC6Q6NXE6 501 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 CARFQ8N187 725 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 BEND7Q8N7W2 519 aaPredicted RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 GPR150Q8NGU9 434 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 CPT1CQ8TCG5 803 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 ZFPM2Q8WW38 1151 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TEKT5Q96M29 485 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 MAP3K3Q99759 626 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 SLC25A23Q9BV35 468 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 IL26Q9NPH9 171 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 DDX56Q9NY93 547 aaKnown RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 FAM153AQ9UHL3 310 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 TMPRSS11EQ9UL52 423 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 G3BP2Q9UN86 482 aaKnown RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 PKP3Q9Y446 797 aa13.28□□□□□ -0.28
TROAP-211ENST00000549891 PCDHGA9Q9Y5G4 932 aaKnown RBP13.28□□□□□ -0.28
TROAP-211ENST00000549891 NBPF19A0A087WUL8 3843 aa13.27□□□□□ -0.28
TROAP-211ENST00000549891 ESPL1Q14674 2120 aa13.27□□□□□ -0.28
TROAP-211ENST00000549891 MED13Q9UHV7 2174 aa13.27□□□□□ -0.28
TROAP-211ENST00000549891 GLYATL1P3A0A0U1RQE8 302 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 OR5K3A6NET4 321 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 SCRG1O75711 98 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 ZBTB11O95625 1053 aaPredicted RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 KRT1P04264 644 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 TPM3P06753 285 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 KLK3P07288 261 aaPredicted RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 MTHFD1P11586 935 aaKnown RBP13.27□□□□□ -0.29
TROAP-211ENST00000549891 PTPN3P26045 913 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 PPP1CAP62136 330 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 DYNLT1P63172 113 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 LONRF2Q1L5Z9 754 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 TMEM220Q6QAJ8 160 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 NPNTQ6UXI9 565 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 GLT6D1Q7Z4J2 308 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 LUZP1Q86V48 1076 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 TMEM126BQ8IUX1 230 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 LURAP1LQ8IV03 231 aa13.27□□□□□ -0.29
TROAP-211ENST00000549891 RHOT2Q8IXI1 618 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms