RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 FSD1LQ9BXM9 530 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 OSBPL8Q9BZF1 889 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 LACRTQ9GZZ8 138 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 RAB33BQ9H082 229 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 ZNF768Q9H5H4 540 aaKnown RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 LUC7LQ9NQ29 371 aaKnown RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 EPHA6Q9UF33 1036 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 ARL5AQ9Y689 179 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 ASH1LQ9NR48 2969 aaKnown RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 AGAP14A8MT82 685 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 POLR1CO15160 346 aaPredicted RBP13.17□□□□□ -0.3
GCN1-206ENST00000549815 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
GCN1-206ENST00000549815 ANXA9O76027 345 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 STK17BO94768 372 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 RBP3P10745 1247 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 AMD1P17707 334 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 VCLP18206 1134 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 PSMB4P28070 264 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 TNNT3P45378 269 aaPredicted RBP13.17□□□□□ -0.3
GCN1-206ENST00000549815 SH3BP2P78314 561 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 XIAPP98170 497 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 ABHD18Q0P651 414 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 MAP7Q14244 749 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 NFE2L1Q14494 772 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 TAF1AQ15573 450 aaPredicted RBP13.17□□□□□ -0.3
GCN1-206ENST00000549815 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 AMZ2Q86W34 360 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 CDKL3Q8IVW4 592 aaPredicted RBP13.17□□□□□ -0.3
GCN1-206ENST00000549815 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 KLHL6Q8WZ60 621 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 TTC25Q96NG3 672 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 TGM7Q96PF1 710 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 FAM118BQ9BPY3 351 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 ARHGAP9Q9BRR9 750 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 ZCCHC2Q9C0B9 1178 aaKnown RBP13.17□□□□□ -0.3
GCN1-206ENST00000549815 SEMA5BQ9P283 1151 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 PKP3Q9Y446 797 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 KCTD3Q9Y597 815 aa13.17□□□□□ -0.3
GCN1-206ENST00000549815 GRID2IPA4D2P6 1211 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 ZNF891A8MT65 544 aaPredicted RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 STX7O15400 261 aaKnown RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 SGTAO43765 313 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 PRAMEF1O95521 474 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 PYGMP11217 842 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 ZNF28P17035 718 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 LPOP22079 712 aaPredicted RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 RWDD2BP57060 319 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 EIF3EP60228 445 aaKnown RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 PPP1CAP62136 330 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 NFATC3Q12968 1075 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 RPE65Q16518 533 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 BEND7Q8N7W2 519 aaPredicted RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 APOL2Q9BQE5 337 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 GEMIN8Q9NWZ8 242 aaKnown RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 FKBPLQ9UIM3 349 aa13.16□□□□□ -0.3
GCN1-206ENST00000549815 SETXQ7Z333 2677 aaKnown RBP13.16□□□□□ -0.3
GCN1-206ENST00000549815 SPTA1P02549 2419 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 C5orf60A6NFR6 353 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 C2orf81A6NN90 581 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 NKX2-8O15522 239 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 KCNN4O15554 427 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 SRP72O76094 671 aaKnown RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 SFTPCP11686 197 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 FGF5P12034 268 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 MSH3P20585 1137 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 STAT5AP42229 794 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 HALP42357 657 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 SEPHS1P49903 392 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 VAV2P52735 878 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 UNC5BQ8IZJ1 945 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 OR4K2Q8NGD2 314 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 OR13C4Q8NGS5 318 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 NAT14Q8WUY8 206 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 ZNF514Q96K75 400 aaPredicted RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 LINC00615Q96LM1 132 aaPredicted RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 OR6C1Q96RD1 312 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 INSM2Q96T92 566 aaPredicted RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 C19orf43Q9BQ61 176 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 TRIT1Q9H3H1 467 aaKnown RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 ASB8Q9H765 288 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 GPN2Q9H9Y4 310 aaPredicted RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 ARNT2Q9HBZ2 717 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms