RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CCNL2Q96S94 520 aaPredicted RBP19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC13A1Q9BZW2 595 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 NOD2Q9HC29 1040 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 SIRPGQ9P1W8 387 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 ARL2BPQ9Y2Y0 163 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 PCDHGA8Q9Y5G5 932 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 BSNQ9UPA5 3926 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 FLNCQ14315 2725 aa19.78■□□□□ 0.76
CTDSP2-204ENST00000548823 TDRD6O60522 2096 aaKnown RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 A0A1W2PNU3 283 aaPredicted RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 CDRT15L2A8MXV6 281 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 LDB2O43679 373 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 KIAA0754O94854 1291 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 ADH1BP00325 375 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 ASLP04424 464 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 ITGB6P18564 788 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 C5AR1P21730 350 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 CLN3Q13286 438 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 CDH18Q13634 790 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 UBAP2LQ14157 1087 aaKnown RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 FSCBQ5H9T9 825 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 CGB2Q6NT52 195 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 NEPROQ6NW34 567 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 KDELC2Q7Z4H8 507 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 CLEC14AQ86T13 490 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 SCG3Q8WXD2 468 aaKnown RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 PTPRN2Q92932 1015 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 FAM129BQ96TA1 746 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 C2orf49Q9BVC5 232 aaPredicted RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 C12orf65Q9H3J6 166 aaKnown RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 UCKL1Q9NWZ5 548 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 SLC2A6Q9UGQ3 507 aa19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 MTO1Q9Y2Z2 717 aaKnown RBP19.77■□□□□ 0.76
CTDSP2-204ENST00000548823 DOCK9Q9BZ29 2069 aa19.77■□□□□ 0.75
CTDSP2-204ENST00000548823 FFAR2O15552 330 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 TMCC1O94876 653 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 TGDSO95455 350 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 BPGMP07738 259 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 COL6A2P12110 1019 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 MZF1P28698 734 aaPredicted RBP19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 RGRP47804 291 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 PSMD8P48556 350 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 CSNK1DP48730 415 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 DUSP3P51452 185 aaPredicted RBP19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 SLC20A2Q08357 652 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 ZKSCAN8Q15776 578 aaPredicted RBP19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 CCDC153Q494R4 210 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 ATG16L1Q676U5 607 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 RETSATQ6NUM9 610 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 MFN1Q8IWA4 741 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 OR13J1Q8NGT2 312 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 STYXQ8WUJ0 223 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 PRR11Q96HE9 360 aaPredicted RBP19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 LMLNQ96KR4 655 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 MRGPRX3Q96LB0 322 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 APOLD1Q96LR9 279 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 ARHGAP9Q9BRR9 750 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 KDM4CQ9H3R0 1056 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 EVA1BQ9NVM1 165 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 LHX3Q9UBR4 397 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 VPS28Q9UK41 221 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 FBXO5Q9UKT4 447 aa19.76■□□□□ 0.75
CTDSP2-204ENST00000548823 TTC24A2A3L6 582 aaPredicted RBP19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 PLIN3O60664 434 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 AHSGP02765 367 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 GIMD1P0DJR0 217 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 ALPPL2P10696 532 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 SFTPCP11686 197 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 CSKP41240 450 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 INHBCP55103 352 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 IFT88Q13099 833 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 ARMC2Q8NEN0 867 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 MAPK15Q8TD08 544 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 KLHDC7BQ96G42 594 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 TDRD1Q9BXT4 1180 aaKnown RBP19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 KLHL14Q9P2G3 628 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 VPS51Q9UID3 782 aa19.75■□□□□ 0.75
CTDSP2-204ENST00000548823 EDDM13A0A1B0GTR0 161 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 CCT8L1PA6NM43 557 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 EFSO43281 561 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 CRTAMO95727 393 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 ITGB2P05107 769 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 MYF5P13349 255 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 GABRB3P28472 473 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 MLLT3P42568 568 aaPredicted RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 LEPRP48357 1165 aaKnown RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 CD151P48509 253 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 SCNN1BP51168 640 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 AP1S1P61966 158 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 GRM3Q14832 879 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 LACTB2Q53H82 288 aaPredicted RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 FAM47EQ6ZV65 393 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 OTOAQ7RTW8 1153 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 CCDC91Q7Z6B0 441 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 SRLQ86TD4 932 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 NUDCD3Q8IVD9 361 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 ARL14Q8N4G2 192 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 GPR150Q8NGU9 434 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms