RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NUP160Q12769 1436 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 C1orf226A1L170 272 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SYCE3A1L190 88 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 ATG13O75143 517 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 RSL1D1O76021 490 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 TMCC1O94876 653 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 ZWINTO95229 277 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 CELF2O95319 508 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 GCNT3O95395 438 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 PLAUP00749 431 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 GBAP04062 536 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 INHBAP08476 426 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 VIMP08670 466 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 ETFAP13804 333 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 PFKFB1P16118 471 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 TYMPP19971 482 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 EEF1B2P24534 225 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 DNASE1P24855 282 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 MT3P25713 68 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 CLCN5P51795 746 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SLC12A3P55017 1021 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SNU13P55769 128 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 ASIC1P78348 528 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 HSF1Q00613 529 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 MZT1Q08AG7 82 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 PPIGQ13427 754 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 NAE1Q13564 534 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 TBC1D9BQ66K14 1250 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 TMEM198Q66K66 360 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 PLA2G4FQ68DD2 849 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 GALNT17Q6IS24 598 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 LRIG3Q6UXM1 1119 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 C18orf65Q6ZTR6 163 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 CYB5R4Q7L1T6 521 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 MCM10Q7L590 875 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 TIGD4Q8IY51 512 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 HDDC3Q8N4P3 179 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SLC4A11Q8NBS3 891 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SEPT1Q8WYJ6 367 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 RNF183Q96D59 192 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SLITRK1Q96PX8 696 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 FCRL5Q96RD9 977 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 KRT23Q9C075 422 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 ANO10Q9NW15 660 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 DNAJB4Q9UDY4 337 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 IPO11Q9UI26 975 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 COG5Q9UP83 839 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 CEPT1Q9Y6K0 416 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.23□□□□□ -1.73
SCAF11-210ENST00000547654 RAD54L2Q9Y4B4 1467 aa4.23□□□□□ -1.73
SCAF11-210ENST00000547654 CFAP43Q8NDM7 1665 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 A0A087WV48 116 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 EME2A4GXA9 379 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TRIM64CA6NLI5 447 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 KLRF2D3W0D1 207 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ATP2A1O14983 1001 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 RNMTO43148 476 aaKnown RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 BCAS2O75934 225 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 WNT1P04628 370 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ZFYP08048 801 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 FAM58BPP0C7Q3 252 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TFPIP10646 304 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ACADLP28330 430 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 SHMT1P34896 483 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 RYKP34925 604 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 SLC16A2P36021 539 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 GPR12P47775 334 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CENPAP49450 140 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CDH13P55290 713 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 YBEYP58557 167 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 SIRPAP78324 504 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 PPATQ06203 517 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 SLC9C1Q4G0N8 1177 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ZNF585BQ52M93 769 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 HSP90AA5PQ58FG0 334 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 SHEQ5VZ18 495 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 FAM91A1Q658Y4 838 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CASC1Q6TDU7 716 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TMEM270Q6UE05 265 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 USP43Q70EL4 1123 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 LDB1Q86U70 411 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 HAPLN4Q86UW8 402 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TMC8Q8IU68 726 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 CLYBLQ8N0X4 340 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 FBXO39Q8N4B4 442 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ZBTB2Q8N680 514 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 RTL3Q8N8U3 475 aaKnown RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 BEST2Q8NFU1 509 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 OR4N2Q8NGD1 307 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TRPC4APQ8TEL6 797 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 ROBO4Q8WZ75 1007 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 PIGKQ92643 395 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 NXNL1Q96CM4 212 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 SPACA9Q96E40 222 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-210ENST00000547654 BICD1Q96G01 975 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 NLRP4Q96MN2 994 aa4.22□□□□□ -1.73
SCAF11-210ENST00000547654 TSGA13Q96PP4 275 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms