RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	TBC1D21	Q8IYX1	336 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CARNMT1	Q8N4J0	409 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	SMYD1	Q8NB12	490 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CNIH3	Q8TBE1	160 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	PYCR2	Q96C36	320 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	ROGDI	Q9GZN7	287 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	UBA2	Q9UBT2	640 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	OAS3	Q9Y6K5	1087 aa	Known RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	PKM	P14618	531 aa	Known RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	GATM	P50440	423 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CCT8	P50990	548 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	PURA	Q00577	322 aa	Known RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	TMEM126B	Q8IUX1	230 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	BRSK1	Q8TDC3	778 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	MCMBP	Q9BTE3	642 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	TRIM62	Q9BVG3	475 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	MAGEA10	P43363	369 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	ALDH3B2	P48448	385 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	DGKE	P52429	567 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	MADCAM1	Q13477	382 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CYBRD1	Q53TN4	286 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	FAM117B	Q6P1L5	589 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	LETMD1	Q6P1Q0	360 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CENPS	Q8N2Z9	138 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CCDC97	Q96F63	343 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	LHPP	Q9H008	270 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	SDR39U1	Q9NRG7	319 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	POLR3B	Q9NW08	1133 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	COMMD8	Q9NX08	183 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	CORIN	Q9Y5Q5	1042 aa		12.83	□□□□□ -0.36
BRF1-210	ENST00000547374	PABPN1L	A6NDY0	278 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	BBIP1	A8MTZ0	92 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	hCG_2039718	K7EN88	272 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	KDM1A	O60341	852 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	MITF	O75030	526 aa	Predicted RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	CPSF4	O95639	269 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	NTRK1	P04629	796 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	RHOC	P08134	193 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	MMP2	P08253	660 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	FCGR1A	P12314	374 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	RXRG	P48443	463 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ACADVL	P49748	655 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	TMED10	P49755	219 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ARSF	P54793	590 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	SPANXN4	Q5MJ08	99 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	BROX	Q5VW32	411 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	CYP20A1	Q6UW02	462 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ADCK1	Q86TW2	530 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	OR4F6	Q8NGB9	312 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ARRDC2	Q8TBH0	407 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	IRGQ	Q8WZA9	623 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	FUBP1	Q96AE4	644 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	GPATCH1	Q9BRR8	931 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	GIT1	Q9Y2X7	761 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	B4GALT3	O60512	393 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ANXA6	P08133	673 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	BMP1	P13497	986 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ERVPABLB-1	P60509	514 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	TRIM32	Q13049	653 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	C2orf69	Q8N8R5	385 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	FAM120B	Q96EK7	910 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ATOH8	Q96SQ7	321 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	MAF1	Q9H063	256 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	RAD21L1	Q9H4I0	556 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	PCDHB5	Q9Y5E4	795 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	FGF1	P05230	155 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	GPI	P06744	558 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ABCB1	P08183	1280 aa	Predicted RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ATXN1L	P0C7T5	689 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	FDXR	P22570	491 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	MYF6	P23409	242 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	RPL9	P32969	192 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	CYP4F2	P78329	520 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	CYP4F3	Q08477	520 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ABRAXAS2	Q15018	415 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	SLC36A3	Q495N2	470 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	CCNYL2	Q5T2Q4	361 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	BTLA	Q7Z6A9	289 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	TPD52L3	Q96J77	140 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	OR52E6	Q96RD3	313 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	TDRD1	Q9BXT4	1180 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	SEZ6L	Q9BYH1	1024 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	CIPC	Q9C0C6	399 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	RERGL	Q9H628	205 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ACTR8	Q9H981	624 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	ITM2C	Q9NQX7	267 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	VAPA	Q9P0L0	249 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	FCF1	Q9Y324	198 aa	Known RBP	12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	PCDHB3	Q9Y5E6	796 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	RAI2	Q9Y5P3	530 aa		12.82	□□□□□ -0.36
BRF1-210	ENST00000547374	DLGAP1	O14490	977 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	PFDN6	O15212	129 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	INMT	O95050	263 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	RASAL1	O95294	804 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	NDST3	O95803	873 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	MAP2K4	P45985	399 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	SEPHS1	P49903	392 aa		12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	ZNF157	P51786	506 aa	Predicted RBP	12.81	□□□□□ -0.36
BRF1-210	ENST00000547374	KLHL23	Q8NBE8	558 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms