RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CFAP73A6NFT4 308 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ZNF197O14709 1029 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 BAG2O95816 211 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ALDOCP09972 364 aaKnown RBP11.79□□□□□ -0.52
CCDC38-202ENST00000546386 CPOXP36551 454 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 IL12RB1P42701 662 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 RASSF2P50749 326 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 ST8SIA6P61647 398 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 HYAL1Q12794 435 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 CCSMST1Q4G0I0 132 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 TWIST2Q8WVJ9 160 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 CNDP1Q96KN2 507 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 COPS8Q99627 209 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 HTATIP2Q9BUP3 242 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 HCN2Q9UL51 889 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 PCYT1BQ9Y5K3 369 aaPredicted RBP11.79□□□□□ -0.52
CCDC38-202ENST00000546386 CFAP20Q9Y6A4 193 aaKnown RBP11.79□□□□□ -0.52
CCDC38-202ENST00000546386 AK5Q9Y6K8 562 aa11.79□□□□□ -0.52
CCDC38-202ENST00000546386 KERAO60938 352 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 HNRNPA1P09651 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC38-202ENST00000546386 IGFBP4P22692 258 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 ITPKAP23677 461 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 PDHA2P29803 388 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 TIE1P35590 1138 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 DPP6P42658 865 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 PSMD8P48556 350 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 NEK2P51955 445 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 RALGDSQ12967 914 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 SF1Q15637 639 aaKnown RBP11.78□□□□□ -0.52
CCDC38-202ENST00000546386 CCDC85BQ15834 202 aaPredicted RBP11.78□□□□□ -0.52
CCDC38-202ENST00000546386 DUSP6Q16828 381 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 ZXDCQ2QGD7 858 aaPredicted RBP11.78□□□□□ -0.52
CCDC38-202ENST00000546386 EGFLAMQ63HQ2 1017 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 FBXL19Q6PCT2 694 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 SBSNQ6UWP8 590 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 CHPFQ8IZ52 775 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 VPS33AQ96AX1 596 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 CD93Q9NPY3 652 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 ZDHHC7Q9NXF8 308 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 CLDND1Q9NY35 253 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 TMEM98Q9Y2Y6 226 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 CLGNO14967 610 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 ELFN1P0C7U0 828 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 EZRP15311 586 aaKnown RBP11.78□□□□□ -0.52
CCDC38-202ENST00000546386 ITGAXP20702 1163 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 LAMB3Q13751 1172 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 RCN1Q15293 331 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 GAB4Q2WGN9 574 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 VPS26BQ4G0F5 336 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 SCUBE1Q8IWY4 988 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 RBFAQ8N0V3 343 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 OR2T11Q8NH01 316 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 KCNJ9Q92806 393 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 ECHDC3Q96DC8 303 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 C19orf60Q96EN9 201 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 PANX3Q96QZ0 392 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 CDRT15Q96T59 188 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 DERL2Q9GZP9 239 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 FAM83DQ9H4H8 585 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 SERGEFQ9UGK8 458 aa11.78□□□□□ -0.52
CCDC38-202ENST00000546386 A0A088AWK7 358 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 UBDO15205 165 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 FFAR2O15552 330 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 SOCS5O75159 536 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 ADH1CP00326 375 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 ESR1P03372 595 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 ATP5BP06576 529 aaKnown RBP11.77□□□□□ -0.52
CCDC38-202ENST00000546386 HGFP14210 728 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 MAT2AP31153 395 aaKnown RBP11.77□□□□□ -0.52
CCDC38-202ENST00000546386 KPNA2P52292 529 aaKnown RBP11.77□□□□□ -0.52
CCDC38-202ENST00000546386 HMGCS1Q01581 520 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 UBE3AQ05086 875 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 UGT3A2Q3SY77 523 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 CRTC3Q6UUV7 619 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 FAM124AQ86V42 546 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 RAB3IPQ96QF0 476 aaPredicted RBP11.77□□□□□ -0.52
CCDC38-202ENST00000546386 ZFP14Q9HCL3 533 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 TMEM51Q9NW97 253 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 LNPEPQ9UIQ6 1025 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 MID2Q9UJV3 735 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 MAFFQ9ULX9 164 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 DHRS7Q9Y394 339 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 TRPM6Q9BX84 2022 aa11.77□□□□□ -0.52
CCDC38-202ENST00000546386 AZIN1O14977 448 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 AOC1P19801 751 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 GJA4P35212 333 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 ERVPABLB-1P60509 514 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 TBL3Q12788 808 aaKnown RBP11.77□□□□□ -0.53
CCDC38-202ENST00000546386 CAPRIN1Q14444 709 aaKnown RBP11.77□□□□□ -0.53
CCDC38-202ENST00000546386 KRT72Q14CN4 511 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 NAA25Q14CX7 972 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 CPSF6Q16630 551 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC38-202ENST00000546386 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
CCDC38-202ENST00000546386 TMPRSS6Q8IU80 811 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 ZBTB2Q8N680 514 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.53
CCDC38-202ENST00000546386 CLHC1Q8NHS4 586 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms