RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ASB8Q9H765 288 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 C10orf88Q9H8K7 445 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 GPN2Q9H9Y4 310 aaPredicted RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 TRIM10Q9UDY6 481 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 EPHA6Q9UF33 1036 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 PILRAQ9UKJ1 303 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 TMEM184BQ9Y519 407 aaPredicted RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 HEMK1Q9Y5R4 338 aaPredicted RBP9.19□□□□□ -0.94
YBX3-218ENST00000546298 SLC30A1Q9Y6M5 507 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 DMXL2Q8TDJ6 3036 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 CFAP47Q6ZTR5 3102 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 LRRK1Q38SD2 2015 aa9.19□□□□□ -0.94
YBX3-218ENST00000546298 RCCD1A6NED2 376 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 OR2AG2A6NM03 316 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 OR52A4PA6NMU1 304 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 GOLGA6L6A8MZA4 724 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 J3QKU1 62 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 PSMD3O43242 534 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 RASSF9O75901 435 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 SRP72O76094 671 aaKnown RBP9.18□□□□□ -0.94
YBX3-218ENST00000546298 STK17BO94768 372 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 PRAMEF1O95521 474 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 LIFP15018 202 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ITGALP20701 1170 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 PSMB4P28070 264 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ADRA1AP35348 466 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 HADHAP40939 763 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 CAPZBP47756 277 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ARSDP51689 593 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 CTSCP53634 463 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 GFERP55789 205 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ABHD18Q0P651 414 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 MAP7Q14244 749 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 GPR18Q14330 331 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 IL11RAQ14626 422 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 CLCA4Q14CN2 919 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 TBR1Q16650 682 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 PARP6Q2NL67 630 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 FNBP1LQ5T0N5 605 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 CACHD1Q5VU97 1274 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 METRNLQ641Q3 311 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 IRGCQ6NXR0 463 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 RAD9BQ6WBX8 426 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ARHGEF18Q6ZSZ5 1173 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 PRSS42Q7Z5A4 293 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 EXD3Q8N9H8 876 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 LRRC57Q8N9N7 239 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 OR4K2Q8NGD2 314 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 UBXN4Q92575 508 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ALG3Q92685 438 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 SLC45A3Q96JT2 553 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 CATSPER2Q96P56 530 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 TGM7Q96PF1 710 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 TBL1YQ9BQ87 522 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 SLC12A9Q9BXP2 914 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 SPRY4Q9C004 299 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 FAM117AQ9C073 453 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 SEMA4CQ9C0C4 833 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 LACRTQ9GZZ8 138 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 RAB33BQ9H082 229 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ZNF768Q9H5H4 540 aaKnown RBP9.18□□□□□ -0.94
YBX3-218ENST00000546298 OGFRQ9NZT2 677 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 CRLS1Q9UJA2 301 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ACSL5Q9ULC5 683 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 REXO2Q9Y3B8 237 aaKnown RBP9.18□□□□□ -0.94
YBX3-218ENST00000546298 ARL5AQ9Y689 179 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 DUSP10Q9Y6W6 482 aa9.18□□□□□ -0.94
YBX3-218ENST00000546298 ARHGEF17Q96PE2 2063 aaPredicted RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 LRP4O75096 1905 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 COL27A1Q8IZC6 1860 aaPredicted RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 GRID2IPA4D2P6 1211 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 GAPDHSO14556 408 aaPredicted RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 WT1P19544 449 aaPredicted RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 NDUFS1P28331 727 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 CCR10P46092 362 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 LEPRP48357 1165 aaKnown RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 ARL4DP49703 201 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 SEPHS1P49903 392 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 NFE2L1Q14494 772 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 RPE65Q16518 533 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 P3H1Q32P28 736 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 GPR33Q49SQ1 333 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 BCL7AQ4VC05 210 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 ARMC6Q6NXE6 501 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 ZNF449Q6P9G9 518 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 BORAQ6PGQ7 559 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 SNX20Q7Z614 316 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 BPHLQ86WA6 291 aaPredicted RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 KMT5CQ86Y97 462 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 RASGRP3Q8IV61 690 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 ACRBPQ8NEB7 543 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 OR2L2Q8NH16 312 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 CCDC110Q8TBZ0 833 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 KLHL6Q8WZ60 621 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 LINC00615Q96LM1 132 aaPredicted RBP9.17□□□□□ -0.94
YBX3-218ENST00000546298 ALS2CR12Q96Q35 445 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 CD180Q99467 661 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 COPS8Q99627 209 aa9.17□□□□□ -0.94
YBX3-218ENST00000546298 APOL2Q9BQE5 337 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms