RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 ZNF542PQ5EBM4 170 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 CTSL3PQ5NE16 218 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 GRTP1Q5TC63 336 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 KCTD16Q68DU8 428 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 TCEAL6Q6IPX3 200 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 FAM45BPQ6NSW5 357 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 CNSTQ6PJW8 725 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 RD3Q7Z3Z2 195 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 C11orf96Q7Z7L8 435 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 ZC3HC1Q86WB0 502 aaKnown RBP10.6□□□□□ -0.71
PAAF1-216ENST00000546039 ZNF547Q8IVP9 402 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 SDR16C5Q8N3Y7 309 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 UHMK1Q8TAS1 419 aaKnown RBP10.6□□□□□ -0.71
PAAF1-216ENST00000546039 FAM45AQ8TCE6 357 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 SLC44A1Q8WWI5 657 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 TCEAL3Q969E4 200 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 VPS39Q96JC1 886 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 BIRC8Q96P09 236 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 PAFAH2Q99487 392 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 CCM2Q9BSQ5 444 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 MCMBPQ9BTE3 642 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 AARSD1Q9BTE6 412 aaKnown RBP10.6□□□□□ -0.71
PAAF1-216ENST00000546039 LRRC61Q9BV99 259 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 GSDMCQ9BYG8 508 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 GAREM1Q9H706 876 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 PRSS21Q9Y6M0 314 aa10.6□□□□□ -0.71
PAAF1-216ENST00000546039 PCM1Q15154 2024 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 C17orf113A0A1B0GUU1 675 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 FAM95CA0A1B0GW59 222 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 LNP1A1A4G5 178 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 MGAT4DA6NG13 374 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 E5RI56 91 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 POC1B-GALNT4F8VUJ3 575 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 KPNA5O15131 536 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 POP7O75817 140 aaKnown RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PIAS1O75925 651 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PIAS2O75928 621 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 NUDT17P0C025 328 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 ZNF883P0CG24 379 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 ACP5P13686 325 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 CD9P21926 228 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 EPHA8P29322 1005 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PBLDP30039 288 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 SPRP35270 261 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 MSH2P43246 934 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 ABCG1P45844 678 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 SERPINB9P50453 376 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 CLCNKAP51800 687 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 DMPKQ09013 629 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 SPEM2Q0P670 501 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 TMED2Q15363 201 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 SF3A2Q15428 464 aaKnown RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PLA2G4EQ3MJ16 856 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PRRT3Q5FWE3 981 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 UGT3A1Q6NUS8 523 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 CHST15Q7LFX5 561 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 AMZ2Q86W34 360 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 GKN2Q86XP6 184 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 BEND7Q8N7W2 519 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 GPATCH11Q8N954 259 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 ZNF548Q8NEK5 533 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 OR2L2Q8NH16 312 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 GPBAR1Q8TDU6 330 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 KCNJ9Q92806 393 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 GPR22Q99680 433 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 GTPBP2Q9BX10 602 aaKnown RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 TMEM168Q9H0V1 697 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 TCEAL2Q9H3H9 227 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 FSCN3Q9NQT6 498 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 SEMA4GQ9NTN9 838 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 SLC24A2Q9UI40 661 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 KLF15Q9UIH9 416 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 ZNF180Q9UJW8 692 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PRKAB1Q9Y478 270 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 PCYT1BQ9Y5K3 369 aaPredicted RBP10.59□□□□□ -0.71
PAAF1-216ENST00000546039 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
PAAF1-216ENST00000546039 MYO15AQ9UKN7 3530 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 UQCRHLA0A096LP55 91 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 LIN7AO14910 233 aaPredicted RBP10.58□□□□□ -0.72
PAAF1-216ENST00000546039 AQP9O43315 295 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 NIPSNAP2O75323 286 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 VPS26AO75436 327 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 TRIM16O95361 564 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 APOA4P06727 396 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 UQCRHP07919 91 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 H2AFXP16104 143 aaPredicted RBP10.58□□□□□ -0.72
PAAF1-216ENST00000546039 CNTFP26441 200 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 ACTR1BP42025 376 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 ACTR1AP61163 376 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 ARHGAP8P85298 464 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 CTBSQ01459 385 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 PLOD1Q02809 727 aaPredicted RBP10.58□□□□□ -0.72
PAAF1-216ENST00000546039 SHBQ15464 509 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 SYTL3Q4VX76 610 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 BEND6Q5SZJ8 279 aaPredicted RBP10.58□□□□□ -0.72
PAAF1-216ENST00000546039 RBM20Q5T481 1227 aaKnown RBP10.58□□□□□ -0.72
PAAF1-216ENST00000546039 ZNF549Q6P9A3 640 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.72
PAAF1-216ENST00000546039 KRT222Q8N1A0 295 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms