RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CILP2Q8IUL8 1156 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 SFTPA2Q8IWL1 248 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 OTUD6BQ8N6M0 293 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 KYQ8NBH2 561 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 GPR156Q8NFN8 814 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 ZDHHC1Q8WTX9 485 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 GLMNQ92990 594 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 CFAP36Q96G28 342 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 TCF12Q99081 682 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 FAM129AQ9BZQ8 928 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 FOXP3Q9BZS1 431 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 SAYSD1Q9NPB0 183 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 NCKIPSDQ9NZQ3 722 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 GULP1Q9UBP9 304 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 TBC1D29Q9UFV1 150 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 DNAJC16Q9Y2G8 782 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 RP1P56715 2156 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 CACNA1AO00555 2505 aa20.14■□□□□ 0.81
HMGA2-211ENST00000545998 A6NCN8 305 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 NOBOXO60393 691 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 EML2O95834 649 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 CKMT1AP12532 417 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 CKMT2P17540 419 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 VCLP18206 1134 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 FRG1Q14331 258 aaKnown RBP20.13■□□□□ 0.81
HMGA2-211ENST00000545998 ZNF470Q6ECI4 717 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 KCNMB4Q86W47 210 aa20.13■□□□□ 0.81
HMGA2-211ENST00000545998 SPAARA0A1B0GVQ0 90 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 KLHL33A6NCF5 533 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 MGAT4DA6NG13 374 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 NDUFS3O75489 264 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 DNAJC3Q13217 504 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 NR0B2Q15466 257 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 HSP90AA5PQ58FG0 334 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 XKR5Q6UX68 686 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 C17orf82Q86X59 251 aaPredicted RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 LMNTD2Q8IXW0 634 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 NAGSQ8N159 534 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 OR2L2Q8NH16 312 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 PYROXD1Q8WU10 500 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 CCM2Q9BSQ5 444 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 P2RY12Q9H244 342 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 OSGEPL1Q9H4B0 414 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 TOR4AQ9NXH8 423 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 QSOX1O00391 747 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 PRMT5O14744 637 aaPredicted RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 SNX2O60749 519 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 RHOXF2BP0C7M4 288 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 ERVK-10P10266 1014 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 ACP1P24666 158 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 PBLDP30039 288 aaPredicted RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 RPIAP49247 311 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 DAB2P98082 770 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 ZNF658BQ4V348 819 aaPredicted RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 RNF187Q5TA31 235 aaPredicted RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 FAM83HQ6ZRV2 1179 aaPredicted RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 DENND6AQ8IWF6 608 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 CALML6Q8TD86 181 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 IFT81Q8WYA0 676 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 LPGAT1Q92604 370 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 CERS2Q96G23 380 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 RHOXF2Q9BQY4 288 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 FAM167BQ9BTA0 163 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 VPS37BQ9H9H4 285 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 PRDM8Q9NQV8 689 aa20.12■□□□□ 0.81
HMGA2-211ENST00000545998 IARS2Q9NSE4 1012 aaKnown RBP20.12■□□□□ 0.81
HMGA2-211ENST00000545998 C17orf113A0A1B0GUU1 675 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 PFDN6O15212 129 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 S1PR4O95977 384 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 GSTM1P09488 218 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 OR56A5P0C7T3 313 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 RPS3P23396 243 aaKnown RBP eCLIP20.11■□□□□ 0.81
HMGA2-211ENST00000545998 ECHS1P30084 290 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 SLC1A2P43004 574 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 ACADVLP49748 655 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 DUSP3P51452 185 aaPredicted RBP20.11■□□□□ 0.81
HMGA2-211ENST00000545998 SIM1P81133 766 aaPredicted RBP20.11■□□□□ 0.81
HMGA2-211ENST00000545998 GSTM4Q03013 218 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 CTBP1Q13363 440 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 NFE2L1Q14494 772 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 HLTFQ14527 1009 aaKnown RBP eCLIP20.11■□□□□ 0.81
HMGA2-211ENST00000545998 C14orf28Q4W4Y0 310 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 METRNLQ641Q3 311 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 CCDC25Q86WR0 208 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 PATE1Q8WXA2 126 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 INTS10Q9NVR2 710 aaKnown RBP20.11■□□□□ 0.81
HMGA2-211ENST00000545998 PADI4Q9UM07 663 aa20.11■□□□□ 0.81
HMGA2-211ENST00000545998 EME2A4GXA9 379 aaPredicted RBP20.1■□□□□ 0.81
HMGA2-211ENST00000545998 F3P13726 295 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 IDSP22304 550 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 CARSP49589 748 aaKnown RBP20.1■□□□□ 0.81
HMGA2-211ENST00000545998 ADARP55265 1226 aaKnown RBP20.1■□□□□ 0.81
HMGA2-211ENST00000545998 ZNF789Q5FWF6 425 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 AGAP9Q5VTM2 703 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 GUSBP11Q6P575 273 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 TRMT10BQ6PF06 316 aaKnown RBP20.1■□□□□ 0.81
HMGA2-211ENST00000545998 IYDQ6PHW0 289 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 WASH2PQ6VEQ5 465 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 LRRC6Q86X45 466 aa20.1■□□□□ 0.81
HMGA2-211ENST00000545998 CNTN4Q8IWV2 1026 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms