RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 MLPHQ9BV36 600 aaPredicted RBP12.57□□□□□ -0.4
USP28-212ENST00000544750 MFRPQ9BY79 579 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 SLAMF7Q9NQ25 335 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 RBM22Q9NW64 420 aaKnown RBP eCLIP12.57□□□□□ -0.4
USP28-212ENST00000544750 TMPRSS11EQ9UL52 423 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 DNAJC16Q9Y2G8 782 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 WDR37Q9Y2I8 494 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 SCINQ9Y6U3 715 aa12.57□□□□□ -0.4
USP28-212ENST00000544750 POLQO75417 2590 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 PDZD2O15018 2839 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 CPNE3O75131 537 aaKnown RBP12.56□□□□□ -0.4
USP28-212ENST00000544750 CAPN1P07384 714 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 CD48P09326 243 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 CA4P22748 312 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 FECHP22830 423 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 CCNCP24863 283 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 ARSEP51690 589 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 DRG2P55039 364 aaKnown RBP12.56□□□□□ -0.4
USP28-212ENST00000544750 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 NCBP2-AS2Q69YL0 99 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 LCN10Q6JVE6 187 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 TIGD7Q6NT04 549 aaPredicted RBP12.56□□□□□ -0.4
USP28-212ENST00000544750 KMT5CQ86Y97 462 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 VSTM4Q8IW00 320 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 RHOT1Q8IXI2 618 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 GLIS1Q8NBF1 620 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 GPR150Q8NGU9 434 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 ZNF653Q96CK0 615 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 ZNF501Q96CX3 271 aaPredicted RBP12.56□□□□□ -0.4
USP28-212ENST00000544750 SNRNP40Q96DI7 357 aaKnown RBP12.56□□□□□ -0.4
USP28-212ENST00000544750 LRFN5Q96NI6 719 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 RANBP9Q96S59 729 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 NUP85Q9BW27 656 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 SPATA16Q9BXB7 569 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 CHST8Q9H2A9 424 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 NENFQ9UMX5 172 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 SVILO95425 2214 aa12.56□□□□□ -0.4
USP28-212ENST00000544750 KRT86O43790 486 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 VEGFDO43915 354 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 MTX2O75431 263 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 TMEM63AO94886 807 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 RAB40ALP0C0E4 278 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 IDSP22304 550 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 HNRNPH3P31942 346 aaKnown RBP12.55□□□□□ -0.4
USP28-212ENST00000544750 ITGA1P56199 1179 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 TUBB4BP68371 445 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 NR6A1Q15406 480 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 IFI16Q16666 785 aaKnown RBP12.55□□□□□ -0.4
USP28-212ENST00000544750 CRB2Q5IJ48 1285 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 TMC3Q7Z5M5 1100 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 NIPA2Q8N8Q9 360 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 LRRN4Q8WUT4 740 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 MR1Q95460 341 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 CXorf40BQ96DE9 158 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 TRIB3Q96RU7 358 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 BARD1Q99728 777 aaKnown RBP12.55□□□□□ -0.4
USP28-212ENST00000544750 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 ZFYVE1Q9HBF4 777 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 MRPL47Q9HD33 250 aaKnown RBP12.55□□□□□ -0.4
USP28-212ENST00000544750 LATS2Q9NRM7 1088 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 SLC5A6Q9Y289 635 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 LUC7L2Q9Y383 392 aaKnown RBP12.55□□□□□ -0.4
USP28-212ENST00000544750 CNTRLQ7Z7A1 2325 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 AKAP9Q99996 3911 aa12.55□□□□□ -0.4
USP28-212ENST00000544750 F8P00451 2351 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 A0A087X0T9 212 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 TLCD2A6NGC4 264 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 ZNF185O15231 689 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 CBFA2T2O43439 604 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 SCRG1O75711 98 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 CDK14O94921 469 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 SERPING1P05155 500 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 TPM3P06753 285 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 FAM228BP0C875 321 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 ELAVL4P26378 380 aaKnown RBP12.54□□□□□ -0.4
USP28-212ENST00000544750 RORAP35398 523 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 CD86P42081 329 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 HSD11B2P80365 405 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 DPYSL3Q14195 570 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
USP28-212ENST00000544750 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
USP28-212ENST00000544750 ZRANB3Q5FWF4 1079 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 PLEKHS1Q5SXH7 462 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 FAM69BQ5VUD6 431 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 ALS2CLQ60I27 953 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 SARM1Q6SZW1 724 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 GAS2L3Q86XJ1 694 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 DSELQ8IZU8 1212 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 CNTD1Q8N815 330 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 ENDOVQ8N8Q3 282 aaKnown RBP12.54□□□□□ -0.4
USP28-212ENST00000544750 TMEM102Q8N9M5 508 aaPredicted RBP12.54□□□□□ -0.4
USP28-212ENST00000544750 C5orf34Q96MH7 638 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 VPS35Q96QK1 796 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 CD180Q99467 661 aa12.54□□□□□ -0.4
USP28-212ENST00000544750 DNAJC7Q99615 494 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms