RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NAT9Q9BTE0 207 aa14.84□□□□□ -0.03
CD9-210ENST00000543916 PRDM8Q9NQV8 689 aa14.84□□□□□ -0.03
CD9-210ENST00000543916 NCKIPSDQ9NZQ3 722 aa14.84□□□□□ -0.03
CD9-210ENST00000543916 ZC3H7BQ9UGR2 993 aaKnown RBP14.84□□□□□ -0.03
CD9-210ENST00000543916 PADI4Q9UM07 663 aa14.84□□□□□ -0.03
CD9-210ENST00000543916 DNMT3AQ9Y6K1 912 aaPredicted RBP14.84□□□□□ -0.03
CD9-210ENST00000543916 PIKFYVEQ9Y2I7 2098 aa14.83□□□□□ -0.03
CD9-210ENST00000543916 COL27A1Q8IZC6 1860 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 EME2A4GXA9 379 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 DKK1O94907 266 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 AP2A2O94973 939 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 TTC4O95801 387 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 F7P08709 466 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 CAV1Q03135 178 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 DMPKQ09013 629 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 NFE2L1Q14494 772 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 HLTFQ14527 1009 aaKnown RBP eCLIP14.83□□□□□ -0.04
CD9-210ENST00000543916 SEPT7Q16181 437 aaKnown RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 TYSND1Q2T9J0 566 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 ZNF658BQ4V348 819 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 C14orf28Q4W4Y0 310 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 GLE1Q53GS7 698 aaKnown RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 CCDC157Q569K6 752 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 DNTTIP2Q5QJE6 756 aaKnown RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 PERM1Q5SV97 790 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 STEAP4Q687X5 459 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 ZNF470Q6ECI4 717 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 MRNIPQ6NTE8 343 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 NEPROQ6NW34 567 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 UNC5AQ6ZN44 842 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 CENPUQ71F23 418 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 LILRA3Q8N6C8 439 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 FBXO36Q8NEA4 188 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 OR2L2Q8NH16 312 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 IFI44Q8TCB0 444 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 TTC1Q99614 292 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 EPB41L5Q9HCM4 733 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 C20orf96Q9NUD7 363 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 ZDHHC18Q9NUE0 388 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 SCHIP1Q9P0W5 487 aaPredicted RBP14.83□□□□□ -0.04
CD9-210ENST00000543916 FAM8A1Q9UBU6 413 aa14.83□□□□□ -0.04
CD9-210ENST00000543916 TRBV23OR9-2A0A075B6M9 112 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 CPED1A4D0V7 1026 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 MGAT4DA6NG13 374 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 PCNX2A6NKB5 2137 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 NDUFS3O75489 264 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 RFPL3O75679 317 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 F3P13726 295 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 BRAFP15056 766 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 VCLP18206 1134 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 OGNP20774 298 aaKnown RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 RPL10P27635 214 aaKnown RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 RPIAP49247 311 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 DUSP3P51452 185 aaPredicted RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 THOC5Q13769 683 aaKnown RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 ZNF789Q5FWF6 425 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 N4BP2L1Q5TBK1 243 aaPredicted RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 EFL1Q7Z2Z2 1120 aaKnown RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 KCNMB4Q86W47 210 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 CILP2Q8IUL8 1156 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 CCNJLQ8IV13 435 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 DENND6AQ8IWF6 608 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 ZBED8Q8IZ13 594 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 SLC37A2Q8TED4 501 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 CCM2Q9BSQ5 444 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 P2RY12Q9H244 342 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 SAYSD1Q9NPB0 183 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 RABGEF1Q9UJ41 708 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 APOBEC2Q9Y235 224 aaKnown RBP14.82□□□□□ -0.04
CD9-210ENST00000543916 RNF215Q9Y6U7 377 aa14.82□□□□□ -0.04
CD9-210ENST00000543916 UBA6A0AVT1 1052 aaPredicted RBP14.81□□□□□ -0.04
CD9-210ENST00000543916 PDZK1P1A8MUH7 402 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 CASC3O15234 703 aaKnown RBP14.81□□□□□ -0.04
CD9-210ENST00000543916 EIF3HO15372 352 aaKnown RBP eCLIP14.81□□□□□ -0.04
CD9-210ENST00000543916 KCNJ13O60928 360 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 OR56A5P0C7T3 313 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 ERVK-10P10266 1014 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 IDSP22304 550 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 PMLP29590 882 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 SLC1A2P43004 574 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 CTBP1Q13363 440 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 HSP90AA5PQ58FG0 334 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 AGAP9Q5VTM2 703 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 METRNLQ641Q3 311 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 TRMT10BQ6PF06 316 aaKnown RBP14.81□□□□□ -0.04
CD9-210ENST00000543916 IYDQ6PHW0 289 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 SDCCAG8Q86SQ7 713 aaPredicted RBP14.81□□□□□ -0.04
CD9-210ENST00000543916 SFRP1Q8N474 314 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 ARL14Q8N4G2 192 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 HM13Q8TCT9 377 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 LKAAEAR1Q8TD35 194 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 LPGAT1Q92604 370 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 CCDC74AQ96AQ1 378 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 CERS2Q96G23 380 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 TCF12Q99081 682 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 FAM114A2Q9NRY5 505 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 IARS2Q9NSE4 1012 aaKnown RBP14.81□□□□□ -0.04
CD9-210ENST00000543916 EVA1BQ9NVM1 165 aa14.81□□□□□ -0.04
CD9-210ENST00000543916 PSMD13Q9UNM6 376 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms