RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CFAP206	Q8IYR0	622 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	FSTL5	Q8N475	847 aa	Predicted RBP	10	□□□□□ -0.81
CPSF7-221	ENST00000543545	MINDY1	Q8N5J2	469 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	ELMO1	Q92556	727 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	FAM136A	Q96C01	138 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	SCARF2	Q96GP6	870 aa	Predicted RBP	10	□□□□□ -0.81
CPSF7-221	ENST00000543545	ELMO2	Q96JJ3	720 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	PANX3	Q96QZ0	392 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	NDN	Q99608	321 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	P2RY12	Q9H244	342 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	CAAP1	Q9H8G2	361 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	IL21R	Q9HBE5	538 aa		10	□□□□□ -0.81
CPSF7-221	ENST00000543545	TRNAU1AP	Q9NX07	287 aa	Known RBP	10	□□□□□ -0.81
CPSF7-221	ENST00000543545	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10	□□□□□ -0.81
CPSF7-221	ENST00000543545	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10	□□□□□ -0.81
CPSF7-221	ENST00000543545	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10	□□□□□ -0.81
CPSF7-221	ENST00000543545	UQCRHL	A0A096LP55	91 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	NEMP2	A6NFY4	417 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SMIM23	A6NLE4	172 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	PDZK1P1	A8MUH7	402 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	FFAR2	O15552	330 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	AQP9	O43315	295 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SGTA	O43765	313 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	KCNJ13	O60928	360 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	LRP3	O75074	770 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	NIPSNAP2	O75323	286 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	VPS26A	O75436	327 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	PIAS2	O75928	621 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	FAM155B	O75949	473 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	APOA4	P06727	396 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	UQCRH	P07919	91 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ANXA6	P08133	673 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	IDS	P22304	550 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	AK4	P27144	223 aa	Predicted RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	PRLHR	P49683	370 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ADAR	P55265	1226 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ARHGAP8	P85298	464 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ILF2	Q12905	390 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	LRP8	Q14114	963 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	BOP1	Q14137	746 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SUZ12	Q15022	739 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	TMED2	Q15363	201 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	UAP1L1	Q3KQV9	507 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	CTSL3P	Q5NE16	218 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	LGSN	Q5TDP6	509 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	HECTD2	Q5U5R9	776 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	NAPRT	Q6XQN6	538 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	TAOK1	Q7L7X3	1001 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ASCL5	Q7RTU5	278 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	OTOA	Q7RTW8	1153 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	GALNT7	Q86SF2	657 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ZC3HC1	Q86WB0	502 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	GKN2	Q86XP6	184 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	GATAD2A	Q86YP4	633 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ZNF547	Q8IVP9	402 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	ZNF548	Q8NEK5	533 aa	Predicted RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	FAM46D	Q8NEK8	389 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	CCL4L1	Q8NHW4	92 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SKA2	Q8WVK7	121 aa	Predicted RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	BIRC8	Q96P09	236 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	TIMM29	Q9BSF4	260 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	AARSD1	Q9BTE6	412 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	EDEM2	Q9BV94	578 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	LRRC61	Q9BV99	259 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	FUT8	Q9BYC5	575 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	RHOJ	Q9H4E5	214 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	PARD6A	Q9NPB6	346 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SPATS2L	Q9NUQ6	558 aa	Known RBP	9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SLC23A2	Q9UGH3	650 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	SLC39A10	Q9ULF5	831 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	VWA7	Q9Y334	891 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	COMMD10	Q9Y6G5	202 aa		9.99	□□□□□ -0.81
CPSF7-221	ENST00000543545	MUC6	Q6W4X9	2439 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	THADA	Q6YHU6	1953 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	TRBV23OR9-2	A0A075B6M9	112 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	FAM95C	A0A1B0GW59	222 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	TLDC2	A0PJX2	215 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	LNP1	A1A4G5	178 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	KPNA5	O15131	536 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	YY2	O15391	372 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	FOXD2	O60548	495 aa	Predicted RBP	9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	KRT38	O76015	456 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	C1QA	P02745	245 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	SHBG	P04278	402 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	CELA2B	P08218	269 aa	Predicted RBP	9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	GSTM1	P09488	218 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	ALPPL2	P10696	532 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	DGKA	P23743	735 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	EPHA8	P29322	1005 aa	Predicted RBP	9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	SERPINB9	P50453	376 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	GSTM4	Q03013	218 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	HSPA14	Q0VDF9	509 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	BIRC2	Q13490	618 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	NFE2L1	Q14494	772 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	USP10	Q14694	798 aa	Known RBP	9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	SHB	Q15464	509 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	SEPT7	Q16181	437 aa	Known RBP	9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	DEFB133	Q30KQ1	61 aa		9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	RBM20	Q5T481	1227 aa	Known RBP	9.98	□□□□□ -0.81
CPSF7-221	ENST00000543545	FAM45BP	Q6NSW5	357 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms