RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TUBB3Q13509 450 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 AAK1Q2M2I8 961 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 LDLRAP1Q5SW96 308 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 CLNKQ7Z7G1 428 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 ADAMTSL2Q86TH1 951 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 MTDHQ86UE4 582 aaKnown RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 CHPFQ8IZ52 775 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 DNASE1L2Q92874 299 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 PHF21BQ96EK2 531 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 DCUN1D1Q96GG9 259 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 ASB2Q96Q27 587 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 WRAP53Q9BUR4 548 aaKnown RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 C1QTNF3Q9BXJ4 246 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 KCTD5Q9NXV2 234 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 NUDT4Q9NZJ9 180 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 APOBEC2Q9Y235 224 aaKnown RBP9.2□□□□□ -0.94
GNE-206ENST00000543356 LAMA3Q16787 3333 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 LRRK1Q38SD2 2015 aa9.2□□□□□ -0.94
GNE-206ENST00000543356 MATN2O00339 956 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 QSOX1O00391 747 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 RNASEH1O60930 286 aaKnown RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 TRIM16O95361 564 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ADH1BP00325 375 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ATP1B2P14415 290 aaPredicted RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 AKT1P31749 480 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 P2RY2P41231 377 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 CCR10P46092 362 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 IDH3AP50213 366 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ZBTB16Q05516 673 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 SMAD4Q13485 552 aaKnown RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 UNC50Q53HI1 259 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 PIP5KL1Q5T9C9 394 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 TXNDC11Q6PKC3 985 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 EPGNQ6UW88 154 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 NLRP8Q86W28 1048 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 MYO1HQ8N1T3 1032 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 FBXO39Q8N4B4 442 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 MAGEC3Q8TD91 643 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 BTN2A2Q8WVV5 523 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 EXT2Q93063 718 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 AP2M1Q96CW1 435 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 FAR2Q96K12 515 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 C8orf33Q9H7E9 229 aaPredicted RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 FBRSQ9HAH7 460 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 PRRC2BQ5JSZ5 2229 aaKnown RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 ANTXRLA6NF34 631 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 C2CD4DB7Z1M9 353 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 FCHO1O14526 889 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 HDAC3O15379 428 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 AP1G1O43747 822 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 CCDC22O60826 627 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ATP5HO75947 161 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 LINGO3P0C6S8 592 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 C6P13671 934 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ENO3P13929 434 aaPredicted RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 GFAPP14136 432 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ITGB6P18564 788 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ALDH18A1P54886 795 aaKnown RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 DPTQ07507 201 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 CNTN1Q12860 1018 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 GBX1Q14549 363 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 PFKFB4Q16877 469 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 SEL1L3Q68CR1 1132 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 CYB5D1Q6P9G0 228 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 SLC30A9Q6PML9 568 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ALYREFQ86V81 257 aaKnown RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 RALGPS2Q86X27 583 aaPredicted RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 GPSM1Q86YR5 675 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 FAM81AQ8TBF8 368 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 GLYATL1Q969I3 302 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 NUS1Q96E22 293 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 MOCOSQ96EN8 888 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 GAS2L1Q99501 681 aaPredicted RBP9.19□□□□□ -0.94
GNE-206ENST00000543356 GABRG3Q99928 467 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 EBF4Q9BQW3 602 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 COG4Q9H9E3 785 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ZDHHC4Q9NPG8 344 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ACSS2Q9NR19 701 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 SAR1AQ9NR31 198 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 TXLNGQ9NUQ3 528 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 ZDHHC2Q9UIJ5 367 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 FADS3Q9Y5Q0 445 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 PDE4DIPQ5VU43 2346 aa9.19□□□□□ -0.94
GNE-206ENST00000543356 H3BQ06 376 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 PLK4O00444 970 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 HGSO14964 777 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 KPNA5O15131 536 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 GRID2O43424 1007 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 DNAJC8O75937 253 aaPredicted RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 SERPINA6P08185 405 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 RPS17P08708 135 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 MSH3P20585 1137 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 C5AR1P21730 350 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 AOAHP28039 575 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 DRD3P35462 400 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 KRT72Q14CN4 511 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 ZRSR2Q15696 482 aaKnown RBP9.18□□□□□ -0.94
GNE-206ENST00000543356 CST6Q15828 149 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 PPP1R3AQ16821 1122 aa9.18□□□□□ -0.94
GNE-206ENST00000543356 ACSBG2Q5FVE4 666 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms