RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 ABCB9Q9NP78 766 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 TRPV5Q9NQA5 729 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 NECTIN3Q9NQS3 549 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 RBM47A0AV96 593 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 MCIDASD6RGH6 385 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 OR4F21O95013 312 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 GOT2P00505 430 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 ICAM3P32942 547 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 PPM1AP35813 382 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 GLUD2P49448 558 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 ZNF132P52740 706 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 LARS2Q15031 903 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 FBXO42Q6P3S6 717 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 PPP1R14BQ96C90 147 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 DNAJB9Q9UBS3 223 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 CACNB4O00305 520 aaPredicted RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 CCNB2O95067 398 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 SLC7A1P30825 629 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 ARFIP1P53367 373 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 SMCO1Q147U7 214 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 PYROXD2Q8N2H3 581 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 GALNT15Q8N3T1 639 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 LIX1Q8N485 282 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 OR10A6Q8NH74 314 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 HAVCR1Q96D42 359 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 TMEM27Q9HBJ8 222 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 GRIN2DO15399 1336 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 AQP12BA6NM10 295 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 TSPAN1O60635 241 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 ESR1P03372 595 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 RLN1P04808 185 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 PGRP06401 933 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 FESP07332 822 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 MMP3P08254 477 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 CDH4P55283 916 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 PRKD1Q15139 912 aaPredicted RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 AQP12AQ8IXF9 295 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 ZNF354BQ96LW1 612 aa12.98□□□□□ -0.33
TNC-212ENST00000542877 MOV10Q9HCE1 1003 aaKnown RBP12.98□□□□□ -0.33
TNC-212ENST00000542877 METTL18O95568 372 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 OR1D2P34982 312 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 TIE1P35590 1138 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 NAE1Q13564 534 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 RAPSNQ13702 412 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 MED27Q6P2C8 311 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 RFKQ969G6 155 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 ERLEC1Q96DZ1 483 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 APOBEC3GQ9HC16 384 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 INTS10Q9NVR2 710 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 MRTO4Q9UKD2 239 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 C22orf31O95567 290 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 CORO1AP31146 461 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 GNA12Q03113 381 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 DUSP4Q13115 394 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 CBX3Q13185 183 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 ZDHHC21Q8IVQ6 265 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 OR5K1Q8NHB7 308 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 NKIRAS2Q9NYR9 191 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 MAP4K5Q9Y4K4 846 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 ZNF99A8MXY4 864 aaPredicted RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 PRAMEF1O95521 474 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 PTGER3P43115 390 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 IL10RBQ08334 325 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 BRSK1Q8TDC3 778 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 GSDMCQ9BYG8 508 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 MED28Q9H204 178 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 CKLFQ9UBR5 152 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 GPR25O00155 361 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 GABRDO14764 452 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 INSIG1O15503 277 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 SCN2BO60939 215 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 FGF19O95750 216 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 TOP3BO95985 862 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 RPLP0P05388 317 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 NCK1P16333 377 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 GABRR2P28476 465 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 S100GP29377 79 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 CCR10P46092 362 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 AP3S2P59780 193 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 RPL26P61254 145 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 SRSF11Q05519 484 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 SUZ12Q15022 739 aaKnown RBP12.97□□□□□ -0.33
TNC-212ENST00000542877 TOMM20Q15388 145 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 SLC13A3Q8WWT9 602 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
TNC-212ENST00000542877 FAM234BA2RU67 622 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 CDK14O94921 469 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 KELP23276 732 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 TAS2R39P59534 338 aa12.96□□□□□ -0.33
TNC-212ENST00000542877 DGKZQ13574 1117 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms