RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TAMM41Q96BW9 452 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 CDCA5Q96FF9 252 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF486Q96H40 463 aaPredicted RBP5.85□□□□□ -1.47
XRCC4-206ENST00000542685 SLC39A13Q96H72 371 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 CEP170P1Q96L14 293 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 AK8Q96MA6 479 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 NLRP4Q96MN2 994 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 NT5C1BQ96P26 610 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 VPS35Q96QK1 796 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 STRBPQ96SI9 672 aaKnown RBP5.85□□□□□ -1.47
XRCC4-206ENST00000542685 SECISBP2Q96T21 854 aaKnown RBP5.85□□□□□ -1.47
XRCC4-206ENST00000542685 DOK1Q99704 481 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 C1orf50Q9BV19 199 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 CCSER1Q9C0I3 900 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 WDR12Q9GZL7 423 aaKnown RBP5.85□□□□□ -1.47
XRCC4-206ENST00000542685 GLT8D2Q9H1C3 349 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 VPS33BQ9H267 617 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 HIPK3Q9H422 1215 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 EBF3Q9H4W6 596 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 SLA2Q9H6Q3 261 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 SP140LQ9H930 580 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 NEK6Q9HC98 313 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 SH3GLB2Q9NR46 395 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 FARSBQ9NSD9 589 aaKnown RBP5.85□□□□□ -1.47
XRCC4-206ENST00000542685 PARVAQ9NVD7 372 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 TAS2R1Q9NYW7 299 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 NPAP1Q9NZP6 1156 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 BCAP29Q9UHQ4 241 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 ATP6V1HQ9UI12 483 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 APPL1Q9UKG1 709 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 SNX7Q9UNH6 387 aa5.85□□□□□ -1.47
XRCC4-206ENST00000542685 C10orf71Q711Q0 1435 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 MN1Q10571 1320 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ZSCAN5CA6NGD5 496 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PRPF4O43172 522 aaKnown RBP eCLIP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 SNAP91O60641 907 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 TM7SF2O76062 418 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 OR5F1O95221 314 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PLEKHA8P1O95397 391 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 TGDSO95455 350 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ZBTB11O95625 1053 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 GGPS1O95749 300 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 RPN1P04843 607 aaKnown RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 THP07101 528 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 KRT3P12035 628 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 CCDC130P13994 396 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 MYL6BP14649 208 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ATF6P18850 670 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 RRM2P31350 389 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PTENP60484 403 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 POLR2FP61218 127 aaKnown RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 SSTP61278 116 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PRKCEQ02156 737 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 SMARCB1Q12824 385 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 CDC20Q12834 499 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PPP2R5CQ13362 524 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PIN1Q13526 163 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 THOC5Q13769 683 aaKnown RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 SPARCL1Q14515 664 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 RPS6KA1Q15418 735 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 NPY5RQ15761 445 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ETFDHQ16134 617 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 PDK4Q16654 411 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 DUSP7Q16829 419 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 CERKLQ49MI3 558 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 FBXO43Q4G163 708 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 CAVIN4Q5BKX8 364 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 OGFRL1Q5TC84 451 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 DUPD1Q68J44 220 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 CGB2Q6NT52 195 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 TTC27Q6P3X3 843 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 VSTM1Q6UX27 236 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 TRIM72Q6ZMU5 477 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 GSTA5Q7RTV2 222 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 CCDC25Q86WR0 208 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 GALNT13Q8IUC8 556 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 DENND1CQ8IV53 801 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ELMOD2Q8IZ81 293 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ABHD11Q8NFV4 315 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 RFWD2Q8NHY2 731 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 LHFPL5Q8TAF8 219 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 S100ZQ8WXG8 99 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 JPH3Q8WXH2 748 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 HSPH1Q92598 858 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 INTS12Q96CB8 462 aaKnown RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 TWNKQ96RR1 684 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 DPCDQ9BVM2 203 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-206ENST00000542685 HOXD1Q9GZZ0 328 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 OLFML3Q9NRN5 406 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ZDHHC18Q9NUE0 388 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 SLC7A8Q9UHI5 535 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 GRID1Q9ULK0 1009 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF831Q5JPB2 1677 aa5.84□□□□□ -1.47
XRCC4-206ENST00000542685 ZMYM2Q9UBW7 1377 aa5.83□□□□□ -1.48
XRCC4-206ENST00000542685 MROH5Q6ZUA9 1318 aa5.83□□□□□ -1.48
XRCC4-206ENST00000542685 PCDH11YQ9BZA8 1340 aa5.83□□□□□ -1.48
XRCC4-206ENST00000542685 FAM47DPA6NHR8 397 aa5.83□□□□□ -1.48
XRCC4-206ENST00000542685 LRRIQ4A6NIV6 560 aa5.83□□□□□ -1.48
XRCC4-206ENST00000542685 OR6C65A6NJZ3 312 aa5.83□□□□□ -1.48
XRCC4-206ENST00000542685 GOLGA8JA6NMD2 632 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms