RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 IQCKQ8N0W5 287 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 NAT14Q8WUY8 206 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 RAPGEFL1Q9UHV5 662 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 PRKAB1Q9Y478 270 aa22.75■■□□□ 1.23
HOMER3-205ENST00000542541 FAM95CA0A1B0GW59 222 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 PATE3B3GLJ2 98 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 ARHGAP33O14559 1287 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 VPS26AO75436 327 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 KRT37O76014 449 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 ITGA2BP08514 1039 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 SKIV2L2P42285 1042 aaKnown RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 BNC1Q01954 994 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 GRIK2Q13002 908 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 INSCQ1MX18 579 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 ZNF542PQ5EBM4 170 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 KCTD16Q68DU8 428 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 UGT3A1Q6NUS8 523 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 TDRPQ86YL5 185 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 BEND7Q8N7W2 519 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 DCAKDQ8WVC6 231 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 ELMO2Q96JJ3 720 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 ELF4Q99607 663 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 NDNQ99608 321 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 TIMM29Q9BSF4 260 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 SPATS2LQ9NUQ6 558 aaKnown RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 TAS2R13Q9NYV9 303 aa22.74■■□□□ 1.23
HOMER3-205ENST00000542541 PSMC3IPQ9P2W1 217 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 APOBEC3BQ9UH17 382 aaKnown RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 PNMA8BQ9ULN7 279 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-205ENST00000542541 MGAT4DA6NG13 374 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 RASGRF2O14827 1237 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 CD9P21926 228 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 SLC12A2P55011 1212 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 POU4F1Q01851 419 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 CASP8Q14790 479 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 RASA2Q15283 850 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 HECTD2Q5U5R9 776 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 C11orf96Q7Z7L8 435 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 CROCCP2Q86T23 111 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 OR2L2Q8NH16 312 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 OR2W6PQ8NHA6 318 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 GPR22Q99680 433 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 NCDNQ9UBB6 729 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 SPASTQ9UBP0 616 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 KLF15Q9UIH9 416 aa22.73■■□□□ 1.23
HOMER3-205ENST00000542541 MTO1Q9Y2Z2 717 aaKnown RBP22.73■■□□□ 1.23
HOMER3-205ENST00000542541 IQANK1A0A1B0GTG1 560 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 IQCF5A8MTL0 148 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 CDH16O75309 829 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 NIPSNAP2O75323 286 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 RXRGP48443 463 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 IRX4P78413 519 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 ARHGAP8P85298 464 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 ILF3Q12906 894 aaKnown RBP eCLIP22.72■■□□□ 1.23
HOMER3-205ENST00000542541 ZNF423Q2M1K9 1284 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 RBM20Q5T481 1227 aaKnown RBP22.72■■□□□ 1.23
HOMER3-205ENST00000542541 HDXQ7Z353 690 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 FSTL5Q8N475 847 aaPredicted RBP22.72■■□□□ 1.23
HOMER3-205ENST00000542541 TSPAN17Q96FV3 270 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 TMEM109Q9BVC6 243 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 TMEM168Q9H0V1 697 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 KLHL42Q9P2K6 505 aa22.72■■□□□ 1.23
HOMER3-205ENST00000542541 PCYT1BQ9Y5K3 369 aaPredicted RBP22.72■■□□□ 1.23
HOMER3-205ENST00000542541 YKT6O15498 198 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 CER1O95813 267 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 ZNF806P0C7X5 589 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 ACP5P13686 325 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 GCAP28676 217 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 PLOD1Q02809 727 aaPredicted RBP22.71■■□□□ 1.23
HOMER3-205ENST00000542541 ELOCQ15369 112 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 CCDC6Q16204 474 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 HLA-BQ31612 363 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 PRAMEF14Q5SWL7 426 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 MROH9Q5TGP6 573 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 LRIG3Q6UXM1 1119 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 OTOAQ7RTW8 1153 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 KRT222Q8N1A0 295 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SDR16C5Q8N3Y7 309 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 RIBC1Q8N443 379 aaPredicted RBP22.71■■□□□ 1.23
HOMER3-205ENST00000542541 HM13Q8TCT9 377 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 ASZ1Q8WWH4 475 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 ELMO1Q92556 727 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 MTBPQ96DY7 904 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 GSDMCQ9BYG8 508 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 LATS2Q9NRM7 1088 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SLC39A10Q9ULF5 831 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 NFS1Q9Y697 457 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 TLDC2A0PJX2 215 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 LRP3O75074 770 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 APOA4P06727 396 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SNRPAP09012 282 aaKnown RBP22.71■■□□□ 1.23
HOMER3-205ENST00000542541 ITGB6P18564 788 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SAT1P21673 171 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 PBLDP30039 288 aaPredicted RBP22.71■■□□□ 1.23
HOMER3-205ENST00000542541 SLCO1A2P46721 670 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 CTBSQ01459 385 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 DMPKQ09013 629 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 USP10Q14694 798 aaKnown RBP22.71■■□□□ 1.23
HOMER3-205ENST00000542541 TMED2Q15363 201 aa22.71■■□□□ 1.23
HOMER3-205ENST00000542541 PLA2G4EQ3MJ16 856 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms