RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PPARGP37231 505 aaPredicted RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ALDH3A2P51648 485 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 CLCNKAP51800 687 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ZNF41P51814 821 aaPredicted RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 LIMK1P53667 647 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 HMGN5P82970 282 aaKnown RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 COG2Q14746 738 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ZNF805Q5CZA5 627 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 PLEKHS1Q5SXH7 462 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ERMARDQ5T6L9 678 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 PMS2CLQ68D20 193 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ADALQ6DHV7 355 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 NCEH1Q6PIU2 408 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 CHST9Q7L1S5 443 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 NUP54Q7Z3B4 507 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 DSG4Q86SJ6 1040 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ODF3L1Q8IXM7 274 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ADGRF2Q8IZF7 708 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ZCCHC9Q8N567 271 aaKnown RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 TMCO5AQ8N6Q1 288 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 HUS1BQ8NHY5 278 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 GSDMBQ8TAX9 411 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 GDAP1Q8TB36 358 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 NOC3LQ8WTT2 800 aaKnown RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 SLC20A1Q8WUM9 679 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 CCDC43Q96MW1 224 aaKnown RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 GCNAQ96QF7 691 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 FAM110AQ9BQ89 295 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ACAT2Q9BWD1 397 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 APOL6Q9BWW8 343 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 FAM129AQ9BZQ8 928 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 TKTL2Q9H0I9 626 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 CSTL1Q9H114 145 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 SMARCAD1Q9H4L7 1026 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ERVMER34-1Q9H9K5 563 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 RABL2AQ9UBK7 228 aaPredicted RBP3.48□□□□□ -1.85
LEMD3-204ENST00000542032 MOSPD1Q9UJG1 213 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 A4GNTQ9UNA3 340 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 ATP6V0A2Q9Y487 856 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 CAPN7Q9Y6W3 813 aa3.48□□□□□ -1.85
LEMD3-204ENST00000542032 A0A1W2PQF6 199 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 LILRA5A6NI73 299 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 MYO1GB0I1T2 1018 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 DDX39AO00148 427 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 PLOD2O00469 737 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 PSMA7O14818 248 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 SEC14L5O43304 696 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CFC1BP0CG36 223 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CFC1P0CG37 223 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 IRF1P10914 325 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CDH1P12830 882 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CASQ1P31415 396 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 RPL7AP62424 266 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 PITX1P78337 314 aaPredicted RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 IL1RL1Q01638 556 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 PCLAFQ15004 111 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 TAF7Q15545 349 aaPredicted RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CCDC6Q16204 474 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CTF1Q16619 201 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 EIF2S3LQ2VIR3 472 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 HIST2H2BCQ6DN03 193 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 HIST2H2BDQ6DRA6 164 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 TRNP1Q6NT89 227 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 METTL2BQ6P1Q9 378 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 C19orf48Q6RUI8 117 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 LCTLQ6UWM7 567 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 QSOX2Q6ZRP7 698 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 PIWIL3Q7Z3Z3 882 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 SPATA6LQ8N4H0 392 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 IL17RCQ8NAC3 791 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 TMEM116Q8NCL8 245 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 KCNH5Q8NCM2 988 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 OR2AK2Q8NG84 335 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 SPATA18Q8TC71 538 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 ARHGEF2Q92974 986 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 INTS12Q96CB8 462 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 METTL2AQ96IZ6 378 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 KLHL15Q96M94 604 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 SRSF8Q9BRL6 282 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 H2AFJQ9BTM1 129 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 TRMT61BQ9BVS5 477 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 TRIM6Q9C030 488 aaPredicted RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 DNAI2Q9GZS0 605 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 FBRSL1Q9HCM7 1045 aaKnown RBP3.47□□□□□ -1.85
LEMD3-204ENST00000542032 BPIFA1Q9NP55 256 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 COMMD8Q9NX08 183 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 TAB2Q9NYJ8 693 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 MPP6Q9NZW5 540 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 DNAJB9Q9UBS3 223 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 SH3BGRL2Q9UJC5 107 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 MKLN1Q9UL63 735 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 CCL27Q9Y4X3 112 aa3.47□□□□□ -1.85
LEMD3-204ENST00000542032 C16orf97H3BN30 126 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SNAP23O00161 211 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 FMO6PO60774 539 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SLC22A3O75751 556 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 STAM2O75886 525 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SEC14L2O76054 403 aa3.46□□□□□ -1.86
LEMD3-204ENST00000542032 SEC31AO94979 1220 aaKnown RBP3.46□□□□□ -1.86
LEMD3-204ENST00000542032 CSPG5O95196 566 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms