RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 APPL1Q9UKG1 709 aa3.89□□□□□ -1.79
TSG101-205ENST00000540555 RCOR1Q9UKL0 485 aa3.89□□□□□ -1.79
TSG101-205ENST00000540555 PADI4Q9UM07 663 aa3.89□□□□□ -1.79
TSG101-205ENST00000540555 DAAM1Q9Y4D1 1078 aa3.89□□□□□ -1.79
TSG101-205ENST00000540555 STYXL1Q9Y6J8 313 aa3.89□□□□□ -1.79
TSG101-205ENST00000540555 ITIH6Q6UXX5 1313 aa3.89□□□□□ -1.79
TSG101-205ENST00000540555 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
TSG101-205ENST00000540555 ARHGEF17Q96PE2 2063 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 PLXNA2O75051 1894 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3KA0A087X1G2 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 LOC101059948A0A1B0GTJ6 334 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 FRMD3A2A2Y4 597 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3FA6NER0 549 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 ZNF233A6NK53 670 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 AHRRA9YTQ3 701 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3LB9A6J9 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 EIF3DO15371 548 aaKnown RBP eCLIP3.88□□□□□ -1.79
TSG101-205ENST00000540555 SLC16A6O15403 523 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 LRRTM2O43300 516 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 LRCH4O75427 683 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBX18O95935 607 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 RPLP0P05388 317 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 ATP5BP06576 529 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 FAM163BP0C2L3 166 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TMEM191BP0C7N4 346 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3HP0C7X1 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 FGF3P11487 239 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 CCL4P13236 92 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 COX6B1P14854 86 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TCN2P20062 427 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 MALP21145 153 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 WARSP23381 471 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 SLC6A2P23975 617 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 LMO2P25791 158 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 HOXD9P28356 352 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 CSTF2P33240 577 aaKnown RBP eCLIP3.88□□□□□ -1.79
TSG101-205ENST00000540555 ATP5C1P36542 298 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 SYKP43405 635 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 ACOT2P49753 483 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 PGFP49763 221 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 PGDP52209 483 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 HK3P52790 923 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 ART1P52961 327 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 MAPK10P53779 464 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 RBP5P82980 135 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 SLC25A3Q00325 362 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 SEMA5AQ13591 1074 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 C16orf72Q14CZ0 275 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 MLC1Q15049 377 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 ZNF284Q2VY69 593 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 DEFB133Q30KQ1 61 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 FLYWCH1Q4VC44 716 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 ATP1A1-AS1Q5TC04 95 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 RESP18Q5W5W9 173 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3GQ6DHY5 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3CQ6IPX1 549 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 LVRNQ6Q4G3 990 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 SHC4Q6S5L8 630 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 KYAT3Q6YP21 454 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 UNC13DQ70J99 1090 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 SPRED1Q7Z699 444 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 MMAAQ8IVH4 418 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 CCDC117Q8IWD4 279 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 GRAMD1CQ8IYS0 662 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D3Q8IZP1 549 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 MYO1HQ8N1T3 1032 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 GPD1LQ8N335 351 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 SDR16C5Q8N3Y7 309 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 C3orf20Q8ND61 904 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 ST6GALNAC3Q8NDV1 305 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 CHDHQ8NE62 594 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 IL17RDQ8NFM7 739 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 NLGN4YQ8NFZ3 816 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 GANCQ8TET4 914 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 NOC3LQ8WTT2 800 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 FBXO32Q969P5 355 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 KIAA1143Q96AT1 154 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 DNAJC19Q96DA6 116 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 SNRNP40Q96DI7 357 aaKnown RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 CLIP3Q96DZ5 547 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 C19orf60Q96EN9 201 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 ANKRD36BP1Q96IX9 119 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 BMFQ96LC9 184 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 LRGUKQ96M69 825 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 FIZ1Q96SL8 496 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 IL12RB2Q99665 862 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 TREX2Q9BQ50 279 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 FAM213AQ9BRX8 229 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 STRA6Q9BX79 667 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 GPN2Q9H9Y4 310 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 MCCC2Q9HCC0 563 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 EXOC1Q9NV70 894 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 AURKAIP1Q9NWT8 199 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 RBAKQ9NYW8 714 aaPredicted RBP3.88□□□□□ -1.79
TSG101-205ENST00000540555 TBC1D7Q9P0N9 293 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 COPG2Q9UBF2 871 aa3.88□□□□□ -1.79
TSG101-205ENST00000540555 CHORDC1Q9UHD1 332 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms