RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ACSM2AQ08AH3 577 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 GRIK2Q13002 908 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ACSM2BQ68CK6 577 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PRR23CQ6ZRP0 262 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ANKRD13BQ86YJ7 626 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 LILRA2Q8N149 483 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 BRSK1Q8TDC3 778 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
DNMT1-203ENST00000540357 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 GLI3P10071 1580 aa12.88□□□□□ -0.35
DNMT1-203ENST00000540357 PAPSS2O95340 614 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 POMCP01189 267 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CAPN1P07384 714 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 FMO3P31513 532 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 ALDH3B2P48448 385 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 NUMBP49757 651 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PSEN2P49810 448 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 NRG1Q02297 640 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CDH18Q13634 790 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 LRP8Q14114 963 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 MED22Q15528 200 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CTXN3Q4LDR2 81 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 SLC39A12Q504Y0 691 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 FGD3Q5JSP0 725 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 C6orf141Q5SZD1 244 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 LYPLAL1Q5VWZ2 237 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CEP97Q8IW35 865 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PCYT2Q99447 389 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF490Q9ULM2 529 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CCL22O00626 93 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PRMT5O14744 637 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 DCKP27707 260 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 EPHX2P34913 555 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PBX3P40426 434 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CRYBB1P53674 252 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 GTF2H2Q13888 395 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 GTF2H2CQ6P1K8 395 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CYP20A1Q6UW02 462 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF534Q76KX8 674 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 AP3S1Q92572 193 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PCED1BQ96HM7 432 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 UROC1Q96N76 676 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 DCSTAMPQ9H295 470 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 IPPKQ9H8X2 491 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 POPDC3Q9HBV1 291 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 GDAP2Q9NXN4 497 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PCDHB1Q9Y5F3 818 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 TSPAN3O60637 253 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 LEPRP48357 1165 aaKnown RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PPM1FP49593 454 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 UFM1P61960 85 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 CILP2Q8IUL8 1156 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 SSR3Q9UNL2 185 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PCDHB3Q9Y5E6 796 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 HTR3EA5X5Y0 456 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 PLSCR1O15162 318 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 TMCC2O75069 709 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 STBD1O95210 358 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 SLC36A3Q495N2 470 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 RPS27LQ71UM5 84 aaKnown RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 TMEM74Q96NL1 305 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 AGPAT4Q9NRZ5 378 aa12.87□□□□□ -0.35
DNMT1-203ENST00000540357 EIF2B4Q9UI10 523 aaKnown RBP12.87□□□□□ -0.35
DNMT1-203ENST00000540357 C7orf72A4D263 438 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 PGLSO95336 258 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 OR2B6P58173 313 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 TYW3Q6IPR3 259 aaKnown RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 CYP4Z2PQ8N1L4 340 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 OTULINQ96BN8 352 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 DIABLOQ9NR28 239 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 IGKV6D-21A0A0A0MT36 114 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 RBM47A0AV96 593 aaKnown RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 H3BN98 237 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 EEDO75530 441 aaKnown RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ABCB1P08183 1280 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 OR56A5P0C7T3 313 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF26P17031 533 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 NNMTP40261 264 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 GSTM5P46439 218 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SCNN1GP51170 649 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 RAB25P57735 213 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 ZNF57Q68EA5 555 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-203ENST00000540357 NANOGP8Q6NSW7 305 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 MZT2AQ6P582 158 aa12.86□□□□□ -0.35
DNMT1-203ENST00000540357 SLC2A7Q6PXP3 512 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms