RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MFSD2AQ8NA29 543 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 OR56A4Q8NGH8 313 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ISL2Q96A47 359 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ARL8AQ96BM9 186 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 KLHDC7BQ96G42 594 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 WDR92Q96MX6 357 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PARD6AQ9NPB6 346 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 MRPL40Q9NQ50 206 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SNX15Q9NRS6 342 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TMEM74BQ9NUR3 256 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PRKAB1Q9Y478 270 aa18.64■□□□□ 0.57
TNFRSF1A-213ENST00000540022 QSOX1O00391 747 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TPP1O14773 563 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PHGDHO43175 533 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 OPA1O60313 960 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RFPL1O75677 317 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RETP07949 1114 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 KELP23276 732 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 HTR1BP28222 390 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 MAGEA12P43365 314 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CSRP3P50461 194 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZNF460Q14592 562 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZKSCAN8Q15776 578 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 BCL7AQ4VC05 210 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CRTC3Q6UUV7 619 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TRABD2AQ86V40 505 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TRAPPC5Q8IUR0 188 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GIMAP7Q8NHV1 300 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 OR1E3Q8WZA6 343 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZNF514Q96K75 400 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GPR21Q99679 349 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SLC30A3Q99726 388 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TAS2R13Q9NYV9 303 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 MOSPD1Q9UJG1 213 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PNMA8BQ9ULN7 279 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GPR34Q9UPC5 381 aa18.63■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GPR89AB7ZAQ6 455 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 E5RI56 91 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 BCAT2O15382 392 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 VPS26AO75436 327 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SYF2O95926 243 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 MT-ND3P03897 115 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GPR89BP0CG08 455 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 STMN1P16949 149 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CD9P21926 228 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TYK2P29597 1187 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SERPINB8P50452 374 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CLCN7P51798 805 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SLC12A2P55011 1212 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RAB10P61026 200 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 C11orf96Q7Z7L8 435 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 IQCHQ86VS3 1027 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SIDT2Q8NBJ9 832 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PDXPQ96GD0 296 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SCARF2Q96GP6 870 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PANX3Q96QZ0 392 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SARS2Q9NP81 518 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SUFUQ9UMX1 484 aa18.62■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SPTY2D1-AS1A0A0U1RR47 76 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PRSS38A1L453 326 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TNFRSF10CO14798 259 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GRID2O43424 1007 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 FTH1P02794 183 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CCR7P32248 378 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GMPRP36959 345 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SPEM2Q0P670 501 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 OVGP1Q12889 678 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PTK2BQ14289 1009 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 FZD2Q14332 565 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PPM1JQ5JR12 505 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 NAPRTQ6XQN6 538 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 LRRTM4Q86VH4 590 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CNPY4Q8N129 248 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CD200R1Q8TD46 325 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TSACCQ96A04 125 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TSPAN17Q96FV3 270 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 RMI1Q9H9A7 625 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CYP4F12Q9HCS2 524 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TM7SF3Q9NS93 570 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GULP1Q9UBP9 304 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 KLQ9UEF7 1012 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ZNHIT2Q9UHR6 403 aa18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 NOVA2Q9UNW9 492 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TNRC6BQ9UPQ9 1833 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-213ENST00000540022 GOLGA8RI6L899 631 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TLR4O00206 839 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SCAMP1O15126 338 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 POP7O75817 140 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 WISP3O95389 354 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 C2P06681 752 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 SLC35E2BP0CK96 405 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PBLDP30039 288 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CSNK1EP49674 416 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PDAP1Q13442 181 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 CCDC6Q16204 474 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 ALG11Q2TAA5 492 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 PYCR3Q53H96 274 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TTMPQ5BVD1 217 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 AGBL2Q5U5Z8 902 aa18.6■□□□□ 0.57
TNFRSF1A-213ENST00000540022 TMEM207Q6UWW9 146 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms